Gene Information

Name : Q7A_1634 (Q7A_1634)
Accession : YP_006296103.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : RNA polymerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1652426 - 1652974 bp
Length : 549 bp
Strand : +
Note : PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family

DNA sequence : 
TTGAGTAATACAGCAATATATCAACATGTAGATGTCTGCACAGTGGATTCAATAACTCAAACAAGAGATTCACTGATTAC
AGAGCTTTATCAAAAACATAACAGTTGGCTGATGGGATGGCTATGCAGAAAACTGGGTTGCAGTTTTGATGCTGCCGATC
TGATGCACGACACATTCTCACGCGTCTTGCAAAAAGATGATCTCACCGATATCAAAGAGCCACGGGCCTATCTCACCACC
ATCGCTCATGGCCTTATGGTGAATCATGTTCGACGCCGTGATATTGAAGCGGCTTATCTAGAAGAAATATCTCATTTGTC
CCAAGCCGAAGCACCCTCACCAGAAACCATCAATATCATGATTGAAACGCTAACCCAGATCGATGAAATGTTAGATGGGT
TGCCTGGCAGAGTGCGAAGTGCGTTTTTGTGGTTTCAGCTGGAAGGCTTAAGCCATGCTCAAATCGCTGAAAGGCTATCG
GTTTCCGTGAGCTCTGTTCGTCAGTACATCGCTAAGGCGTTATTACATTGCATTAACATGTCTTCCTAA

Protein sequence : 
MSNTAIYQHVDVCTVDSITQTRDSLITELYQKHNSWLMGWLCRKLGCSFDAADLMHDTFSRVLQKDDLTDIKEPRAYLTT
IAHGLMVNHVRRRDIEAAYLEEISHLSQAEAPSPETINIMIETLTQIDEMLDGLPGRVRSAFLWFQLEGLSHAQIAERLS
VSVSSVRQYIAKALLHCINMSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 7e-36 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_1634 YP_006296103.1 RNA polymerase VFG1049 Protein 3e-36 48