Gene Information

Name : Q7A_1750 (Q7A_1750)
Accession : YP_006296217.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1761197 - 1761928 bp
Length : 732 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCCACAGATAGACAACCGGTTCCGTCAAAAGACTTCATGATACAGGTACAAAATCTGTCACATTCGGTTGATTTGGG
CACCGATAAACTGTCGATTTTACAACAAGTCAATATGGACATTCGTAAAGGCGAGTCTGCAGCCATTGTCGGGCGTTCCG
GTTCAGGTAAAACCACATTACTGGGGTTACTGGCAGGACTGGATTTACCGATCAGTGGAACAGTAAGTCTTGATGGACAT
CTTATCAGTGCTTTGTCTGAAGATGAACGTGCCAGCTTGCGTTCACAACGGGTCGGCTTTGTGTTTCAGTCTTTTCAATT
GTTACCCACATTATCTGCGCTTGAAAATGTGATGTTACCCATAGAGTTAGCTGGCCTACCTAATGTAAAGTCAAAGGCAG
AGAGCTTGCTTAAGCGGGTCGGTTTGGGCGAGCGGATGCAACATACCCCCCGACAATTATCGGGTGGTGAACAACAACGG
GTAGCCATCGCCAGAGCCTTTGCTGTGAATCCTCAAGTGTTATTTGCAGACGAACCTACCGGTAATCTGGACACCCGAAC
TGGTGAGGCGATTACTGAATTATTAATGAATCTGAACAGTGAGCACGGTACAACGCTGGTGATGGTGACGCATGATCAAC
AGCTGGCAGAGCGATGTCAGCGATATTTCATTATTGAGGCAGGCGTGCTGCATGAAAAAACAGAAAAAAATGCAGAGGTG
TTATCTGCATGA

Protein sequence : 
MSTDRQPVPSKDFMIQVQNLSHSVDLGTDKLSILQQVNMDIRKGESAAIVGRSGSGKTTLLGLLAGLDLPISGTVSLDGH
LISALSEDERASLRSQRVGFVFQSFQLLPTLSALENVMLPIELAGLPNVKSKAESLLKRVGLGERMQHTPRQLSGGEQQR
VAIARAFAVNPQVLFADEPTGNLDTRTGEAITELLMNLNSEHGTTLVMVTHDQQLAERCQRYFIIEAGVLHEKTEKNAEV
LSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_1750 YP_006296217.1 lipoprotein releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 4e-36 47
Q7A_1750 YP_006296217.1 lipoprotein releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 3e-35 46
Q7A_1750 YP_006296217.1 lipoprotein releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 3e-27 43