Gene Information

Name : Q7A_176 (Q7A_176)
Accession : YP_006294680.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 183772 - 184311 bp
Length : 540 bp
Strand : -
Note : PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family

DNA sequence : 
ATGAATGCGCCATTGTCTCCACCACCCACAGAGAGCCTGGAAAAACTCTATCAAAATAATTTCAGCTGGTTGCAGAACTG
GTTACGTGAGCGTTTGAGTTGTTCGCATCAGGCGGCAGATTTGGCGCAGGATACGTTTGTAAGATTGCTATCAGCCCCGG
ATTTTAATGGCAAAATTGAGGCTATTCGTGAGCCGCGCAGTTATCTGGTAACGGTAGCAAAGCGGGTGATGATCGACCAT
TTCCGTCGTCGCACGATAGAGCAATCTTACCTGCAGGCCTTAATGCAGCAAACGGAGCAGGAAGTCATCTCGGCAGAGCA
GAGCATGATTGTGCTGGAAACGTTGTATCGCATTGATACCATGCTGGATGGTTTGGGTGTGAAAGTGAAAACCGCTTTTC
TGATGTCCCAGCTTAAAGGCATGACCTATCGTGAAATTGCCGGTGAAATGGGATTGTCAGAAAGCTCGGTTAAAAAATAT
ATGGCCAAAGCCACACAACATTGCCTGTTATTTTCATTATATGAGCAGCTTGATGCATGA

Protein sequence : 
MNAPLSPPPTESLEKLYQNNFSWLQNWLRERLSCSHQAADLAQDTFVRLLSAPDFNGKIEAIREPRSYLVTVAKRVMIDH
FRRRTIEQSYLQALMQQTEQEVISAEQSMIVLETLYRIDTMLDGLGVKVKTAFLMSQLKGMTYREIAGEMGLSESSVKKY
MAKATQHCLLFSLYEQLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 6e-36 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_176 YP_006294680.1 sigma-70 factor VFG1049 Protein 3e-36 47