Name : Q7A_1844 (Q7A_1844) Accession : YP_006296307.1 Strain : Methylophaga sp. JAM1 Genome accession: NC_017857 Putative virulence/resistance : Virulence Product : RTX toxin transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1857287 - 1859488 bp Length : 2202 bp Strand : + Note : PFAM: ABC transporter; Peptidase C39 family; ABC transporter transmembrane region; TIGRFAM: type I secretion system ABC transporter, HlyB family DNA sequence : ATGGATACTGGACTCAATACTCTAGTCGCAATAGCGCGATTCCATCGGCTCCCCGCCGAAGCTGAGCAGCTATCTCATGA GTATGGTGTTCCCGGTGAAGTCTTTACTGATACGCAAATTCTGCAAGCATCCAAAGCACTTACGCTAAAAGCCAAAATTC TCTCCCCAAAATTCGCTCAAATTACTAACGGCATGTTGCCGGCGATTGCCAAAGCAAAAGATGGCAGTTATTTCATTCTG GCGCGTATTTCAAATGCAATAAAAGAAGGTGATTCCGCTCGTCCGGGCGTATTGATCCACGATTTACGTGAAAAAGCTCC AGAGAGTCTAGATCAGGAAGCTTTTGAACTGCGCTGGAGTGGTGAAATCATTGCCATTACCAGACGCCAAGGTCTCGGTG AAAGTCTTCAACAAAAATTTGATATCTCCTGGTTTATTCCTTCACTTGTAAAATATCGAAAGCTTTTCGGTGAAGTGCTA TTGGCTTCATTTTTCCTGCAACTATTTGCCTTAATGACGCCACTGTTTTTTCAGGTCGTTATGGATAAGGTTTTAGTGCA TCGTGGTTTCACCACACTGGATGTGCTCGCTGTCGGTTTCTTTGTTGTCGTGGTGTTTGAAGCTCTGCTGGGCGGAATAC GAAACTACGTGTTATCGCATACAACCAATCGGGTTGATGTTGAACTGGGCTCACGGTTATTTACACATCTTATGGCCTTG CCTATGGCCTATTTTGAATCCAGACAAGTAGGGCAAAATGTAGCCAGGGTCAGAGAGCTTGATACTATCCGTAACTTCAT TACAGGTACAGCACTGACACTGGTTATTGATTTATTCTTTGTTTTCGTCTTTTTGGCGGTCATGTGGTACTACAGCTCTG CACTTACCTGGATAGTACTCGCCACTATCCCGTTTTATATCCTTCTTTCCATTTTCATTACCCCGATATTACGTAAACGT CTGGATGATAAATTCACCCATGGTGCTGCGAATACGGCTTTTCTGACCGAATCAATGACCGGGATTGGTACCGTTAAATC CATGGCCGTTGAACCTCAAATGAAACGAAAGCTGGAAGACCATCTTTCCAGCTATGTGCATTCATCTTTCAAAAGTCAGA ACCTGAACAATGTTGCCAATCAGATAGCCGGTTTAATCAATAAACTGATGACATTGGGCATTATCTGGTGGGGTGCACAT CTGGTTATCGATAATCAAATCACCGTCGGGCAATTAATCGCCTTTAATATGCTCGCTGGTAGAGTGAGCGGTCCTATTCT TAAATTGGTCCAGCTATGGCAAGACTTTCAGCAAGCGGGGATTTCTATTAAACGCTTAGGCGATATCCTCAACACGCCGA GAGAGCCAGGCTTTAATCCCAATCGTTCACGACTGCCAGCTTTACAGGGCGCAGTCACCTTTGACCATATTCGTTTTCGC TATCGTACTGATGGCGCCACCATTCTGGATGACGTTAGCTTGCAAGTGAAGCCCGGTGAAGTTATCGGTATTGTTGGCCG TAGTGGCAGTGGCAAAAGTACGATTACCAAACTCATTCAACGATTGTATATCCCAGAATCAGGTCGCATTGCTATTGATG GTGTGGATTTATCTGTTGTGGATACAGTTTGGTTGCGTAAACAAATTGGTGTGGTATTACAGGAAAACTTTCTGTTTAAC CGAAGTATCAGAGAAAATATAGCCTTAAGCGATCCCTCTATTCCGATGGAACGCGTTATCGCTGCAGCCAAAACGTCTGG AGCACATGAATTTATCGTTGATTTGCCCGAAGGCTATGACAACCTGGTCGGTGAGCAAGGCAGTAATTTATCAGGTGGCC AAAGACAGCGGTTGGCAATAGCCCGCGCTCTTATCAACAATCCTCGAATATTGATTTTTGATGAAGCGACCAGTGCGCTT GATTACGAGTCTGAACGATTAATTCAGGACAATATGGCCAGCATTTGTAAAGGTCGTACCGTGTTTATCATCGCTCATCG GTTAACCACTGTCAGACAATGCAATCGTATTTTTGTGATGGACAAAGGTCGCATCGTAGAGGAAGGAAACCATGATGAGT TGATAGCCAAAAATGGCTACTATGCCAAACTCTATAGCTATCAAAGTCACACACCCGTTTTACATCCTGTTACAGAGAGC AAGGCCAAAGAAAATCCCAACCTTGAAAAGGCCTACTCATGA Protein sequence : MDTGLNTLVAIARFHRLPAEAEQLSHEYGVPGEVFTDTQILQASKALTLKAKILSPKFAQITNGMLPAIAKAKDGSYFIL ARISNAIKEGDSARPGVLIHDLREKAPESLDQEAFELRWSGEIIAITRRQGLGESLQQKFDISWFIPSLVKYRKLFGEVL LASFFLQLFALMTPLFFQVVMDKVLVHRGFTTLDVLAVGFFVVVVFEALLGGIRNYVLSHTTNRVDVELGSRLFTHLMAL PMAYFESRQVGQNVARVRELDTIRNFITGTALTLVIDLFFVFVFLAVMWYYSSALTWIVLATIPFYILLSIFITPILRKR LDDKFTHGAANTAFLTESMTGIGTVKSMAVEPQMKRKLEDHLSSYVHSSFKSQNLNNVANQIAGLINKLMTLGIIWWGAH LVIDNQITVGQLIAFNMLAGRVSGPILKLVQLWQDFQQAGISIKRLGDILNTPREPGFNPNRSRLPALQGAVTFDHIRFR YRTDGATILDDVSLQVKPGEVIGIVGRSGSGKSTITKLIQRLYIPESGRIAIDGVDLSVVDTVWLRKQIGVVLQENFLFN RSIRENIALSDPSIPMERVIAAAKTSGAHEFIVDLPEGYDNLVGEQGSNLSGGQRQRLAIARALINNPRILIFDEATSAL DYESERLIQDNMASICKGRTVFIIAHRLTTVRQCNRIFVMDKGRIVEEGNHDELIAKNGYYAKLYSYQSHTPVLHPVTES KAKENPNLEKAYS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 3e-177 | 55 |
hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 3e-177 | 55 |
hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 3e-177 | 55 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Q7A_1844 | YP_006296307.1 | RTX toxin transporter | VFG1557 | Protein | 2e-177 | 55 |
Q7A_1844 | YP_006296307.1 | RTX toxin transporter | VFG1501 | Protein | 2e-177 | 55 |
Q7A_1844 | YP_006296307.1 | RTX toxin transporter | VFG0907 | Protein | 1e-177 | 55 |
Q7A_1844 | YP_006296307.1 | RTX toxin transporter | VFG0841 | Protein | 2e-174 | 54 |
Q7A_1844 | YP_006296307.1 | RTX toxin transporter | VFG1269 | Protein | 7e-172 | 53 |