Gene Information

Name : Q7A_187 (Q7A_187)
Accession : YP_006294691.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : RNA polymerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 195019 - 195519 bp
Length : 501 bp
Strand : -
Note : PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family

DNA sequence : 
ATGACTACATCTTCCATTGAAAGCTTATACAAAGACCACCACAACTGGCTTTATGGTTGGTTACGCAGCAAGTTAGGCTG
CGCGCACAGTGCAGCCGATCTGGCGCATGACACTTATGTAAGAGTTCTGACTACTGGCAACGTACCTCAAGCTGATGATT
CACGCCGTTATCTATCACAGATTGCCAAAGGTCTAGTGATTGATTTATATCGGCGTCGGCAAATTGAAGCCGCCTATCTG
GAAACGATCAGTCATTTACCCGAGCTGGAAGCGCCTTCGGCAGAAATGCGCCATATCATTATTGAAACATTGCTGGAAAT
AGACAGCATCTTGCAGCAACTTCCGGAAAAAGTACGCAGAGCTTTTTTATTAAGGCAATTTGATGGGCTGAGCTATCAGC
AAATCGCTAAACAATTAAATGTTTCGGTGTCATCAATAGAAAAATATATCGCCAGGGCTTTAGCTGCCTGCTACAAGGCG
ATGGTGTTATATCCATCATGA

Protein sequence : 
MTTSSIESLYKDHHNWLYGWLRSKLGCAHSAADLAHDTYVRVLTTGNVPQADDSRRYLSQIAKGLVIDLYRRRQIEAAYL
ETISHLPELEAPSAEMRHIIIETLLEIDSILQQLPEKVRRAFLLRQFDGLSYQQIAKQLNVSVSSIEKYIARALAACYKA
MVLYPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-33 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_187 YP_006294691.1 RNA polymerase VFG1049 Protein 1e-33 48