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Name : Q7A_2355 (Q7A_2355) Accession : YP_006296800.1 Strain : Methylophaga sp. JAM1 Genome accession: NC_017857 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2409342 - 2411198 bp Length : 1857 bp Strand : - Note : PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family DNA sequence : ATGAACCGATACCCCCTCTGGAAAAATCTACTGGTTGTCGCTGTAATTGTCACGGCCATTATCTATGCCATGCCAAACCT GTTTGGTGATGATCCTGCCGTACAGGTTTCTGCCGGAAGACTGAACAGCGTTGATTTACAGTTGGTTAATGAAATTGAAT CAACACTGAAACAGGCTGAAATTCCCTACAAAGGGGTAGTGCTTGAAGAAAACCGTTTATTGATTCGCTTCAGTGAAGCC GATGAACAGCTCGAGGCACGTGAACTTATTCAGCAAAATCTGAGCTCTGAAGATTATATCGTTGCGTTGAATCTCGCGCC TAATACTCCGGCTTGGTTACGGTCTCTTGGGGCAGAACCAATGAATCTTGGTCTGGATCTACGTGGTGGTGTGCATTTCC TGATGGAAGTGGACATGAATGCGGTGTTGAAGCAAACACTCGAAAGTTATGCCAGCGATATTCGTATTTTATTGCGGGAT AAAACGATTCGCTATACCCAGGTCAATGTAGAAAATGGTGTTTTGGCCTTTGGTTTTCGAGAAACAGCAGATCGGGACGC GGCAATTATAGAAATCGGTCGCGAATACAATGAGCTTGAAGTGGTAATTGATGAAAACGCAGAACGTCCATCAATAGCTA TTAATTTGAACGAAGCTACTGTTCGTGAAACGCAGAATCTGGCTTTACAGCAAAACATCACGACATTGCGAAACCGTATT AATGAACTTGGAGTTGCTGAACCTACCGTTCAGCAGCAGGGGCAAGATCGCATTGTGGTTCAATTGCCGGGTGTTCAGGA TACCGCTCAAGCCAAAAAAATCCTTGGTACCACAGCTACGTTGGAATTTCGCTTAGTCGATTTTGAAAGTGATGTTCAGG ATGCGGTCAACGGACGAGTCCCTGCTAATTCTGAATTATATTATCACCGTGATGGCAGACCTTATCTATTGAATAAGCGG GTGATGTTGACCGGTGAGCATGTTATCAACGCAGCCTCAACGATAGATGGTCAGACTGGTTCGCCAGCCGTATCGGTGAC GTTGGATGGCAAAGGTGCCCGTATTTTCAGCAATATTACCCGTGACAATATCGGTAACCCGATGTCAGTGGTGTTCATTG AGTCTAAAACAGAAACACAGACAATTGATGGTGAAGAAGTTACTGTTCGCCGTCAGCTGCCGGAAATTATCAGTGTCGCG ACAATCCGTGATCAACTCGGTAAAAAATTCCAGATAACTGGTTTGGATAGTACTACGGAAGCACGCGATCTGGCTTTATT ACTTCGAGCTGGTGCATTGGCGGCGCCAATCGATATTGTTGAAGAGCGTACTGTCGGGCCGAGTTTAGGACAGGAAAATA TTGATCAGGGTTTTGCCTCCGTAATGATTGGCTTTGCTCTGGTTCTGGTGTTCATGATTATCTGGTATCGCTTATTTGGC GCGGTGGCTAATCTGGCTTTAGCAGCCAATCTGGTGTTAATTGTGGCGTTGTTATCAATGTTACAGGCCACACTCACCAT GCCGGGTATTGCCGGTATTGTGTTGACTGTTGGTATGGCAGTTGATGCCAATGTGCTTATTTTTGAACGCATTCGGGAAG AGTTAAAACTGGGCAACAGTCCACGCGCCAGCATTGATGCCGGTTATGCAAAAGCATTTTCAACCATTGCTGACGCAAAC ATTACAACATTGATCGCGGCGATAGTGTTGTTTGGCTTTGGTACCGGAACGATTAAGGGGTTTGCTATCACGCTGACGTT AGGCATATTAACCTCAATGTTTACTGCGATTGTGGGCACTCGTATGGTGATTAACCTTGTTTATGGTCGTAAGCAACGAC CAAAATTGTCCATCTAA Protein sequence : MNRYPLWKNLLVVAVIVTAIIYAMPNLFGDDPAVQVSAGRLNSVDLQLVNEIESTLKQAEIPYKGVVLEENRLLIRFSEA DEQLEARELIQQNLSSEDYIVALNLAPNTPAWLRSLGAEPMNLGLDLRGGVHFLMEVDMNAVLKQTLESYASDIRILLRD KTIRYTQVNVENGVLAFGFRETADRDAAIIEIGREYNELEVVIDENAERPSIAINLNEATVRETQNLALQQNITTLRNRI NELGVAEPTVQQQGQDRIVVQLPGVQDTAQAKKILGTTATLEFRLVDFESDVQDAVNGRVPANSELYYHRDGRPYLLNKR VMLTGEHVINAASTIDGQTGSPAVSVTLDGKGARIFSNITRDNIGNPMSVVFIESKTETQTIDGEEVTVRRQLPEIISVA TIRDQLGKKFQITGLDSTTEARDLALLLRAGALAAPIDIVEERTVGPSLGQENIDQGFASVMIGFALVLVFMIIWYRLFG AVANLALAANLVLIVALLSMLQATLTMPGIAGIVLTVGMAVDANVLIFERIREELKLGNSPRASIDAGYAKAFSTIADAN ITTLIAAIVLFGFGTGTIKGFAITLTLGILTSMFTAIVGTRMVINLVYGRKQRPKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-113 | 46 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-113 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-114 | 46 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-114 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-114 | 46 |
