Gene Information

Name : Q7A_2854 (Q7A_2854)
Accession : YP_006297279.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2892893 - 2893411 bp
Length : 519 bp
Strand : +
Note : PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family

DNA sequence : 
ATGGCAGCTATAAGCTCGACACTTGCAGAACAAATAGAGCAGCTCTACAAGGAACATCACAGCTGGTTATCAATTTTTAT
CCAACGACGCCTTGGATGCCCAGATGACACTGCAGACCTCATTCATGACACCTACCTGCGTATTCTGAGTAGCGGCAGGC
TTCCCCCAAAACAGGATTCCAAACGTTTCTTAACTCACATCGCTAAAGGTCTACTAATCGATAATTATCGTCGGAAGCAG
ATTGAAACAGCCTATAAAGAGTATGTTCAACATCTTCCGGAAAACCATGCCCCTTCAGCTGAGTTTCATATGCAGATGAT
TGAGGCCCTCACAGCAATTGATACTTTGTTACATCAATTGCCAGCCAACGTTCGAGAAGCTTTACTTCTCAGACAATTAG
ACAATCTTAGCTATAAAGAAATTGCCATGCGTTTGAACGTCTCCATTTCCTCGGTGGAAAAATATATTGCTAAAGCCTTG
CAAGCTTGTATGGAAGCAACCCTCGAAGATCGTATTTAA

Protein sequence : 
MAAISSTLAEQIEQLYKEHHSWLSIFIQRRLGCPDDTADLIHDTYLRILSSGRLPPKQDSKRFLTHIAKGLLIDNYRRKQ
IETAYKEYVQHLPENHAPSAEFHMQMIEALTAIDTLLHQLPANVREALLLRQLDNLSYKEIAMRLNVSISSVEKYIAKAL
QACMEATLEDRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 7e-30 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_2854 YP_006297279.1 RNA polymerase sigma factor VFG1049 Protein 3e-30 43