Gene Information

Name : Q7A_2969 (Q7A_2969)
Accession : YP_006297389.1
Strain : Methylophaga sp. JAM1
Genome accession: NC_017857
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3004467 - 3005147 bp
Length : 681 bp
Strand : +
Note : PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein

DNA sequence : 
ATGACTGATAACACGGTAATTCGCTGCGAAAAACTGGTAAAGCGCTATAAAGATGGCAACCTTGAAACCCCGGTATTACA
GGATATTAATCTACAGGTGCATGCTGGTGACCGTATTGCGATAGTCGGCAGTTCAGGTTCCGGTAAAAGTACGCTTCTGC
ATCTGCTTGGCGGGCTGGATGGTCCCACTGATGGAAAAATTGAGGTATTGGGTCAGGATATCAGCAAGCTTTCAGTCAAT
GCCCTGAGTAAATTACGCAATCAATCATTAGGTTTTGTTTACCAGTTTCATCATTTATTGCCTGAGTTCACTGCCGAAGA
AAACGTTGCCATGCCACTGGTTATTGGCGGCATGCATCCCAAGGCTGCCAAACAGCAGGCCAATGAACTGTTACAACAGG
TCGGACTGGGGCACCGGGCACATCATAAACCCAGCGAATTATCGGGCGGTGAACGTCAGCGTGCGGCGCTGGCTCGGGCA
TTAATTACCAAACCTGCCTGCCTGTTGGCGGATGAACCTACCGGAAATCTGGATCACCAGACTGCTGAAGGTATTTTTGA
TTTGATTATGAAATTGAATACGGAGCTGGGAACAGCGCTGGTCATTGTGACACATGACAGGCAACTTGCCGCCAGAATGG
ATCAGCAATTAACGTTGATTGATGGCAAATTACAAAACTGA

Protein sequence : 
MTDNTVIRCEKLVKRYKDGNLETPVLQDINLQVHAGDRIAIVGSSGSGKSTLLHLLGGLDGPTDGKIEVLGQDISKLSVN
ALSKLRNQSLGFVYQFHHLLPEFTAEENVAMPLVIGGMHPKAAKQQANELLQQVGLGHRAHHKPSELSGGERQRAALARA
LITKPACLLADEPTGNLDHQTAEGIFDLIMKLNTELGTALVIVTHDRQLAARMDQQLTLIDGKLQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7A_2969 YP_006297389.1 lipoprotein releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 2e-41 45
Q7A_2969 YP_006297389.1 lipoprotein releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 9e-37 45
Q7A_2969 YP_006297389.1 lipoprotein releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 8e-35 41