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Name : lysS (PIN17_A1110) Accession : YP_006299010.1 Strain : Genome accession: NC_017861 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1138102 - 1139832 bp Length : 1731 bp Strand : + Note : - DNA sequence : ATGAACGTTTTAGAATTATCAGAACAGGAGATAGTACGCCGTCAGAGTTTGCAGGAATTGCGCAATATGGGCATCGACCC ATACCCAGCAGCAGAGTTTCCAACCAATGCTTACTCTACGGATATAAAGGCTGAATTTAACGAAGACGAGAAACGCGAAG TCATTATTGCAGGTCGCCTTATGGGACGCCGTGTAATGGGCAAGGCTTCGTTTGCAGAAATACAGGACAGCAAGGGCAGA ATACAGGTTTACATTACCCGTGATGAGCTTTGCCCAACCGAGAATAAAGACATTTACAATGTTGTTTTCAAGAAGTTGCT TGACATTGGCGACTTTATCGGAATCAGGGGTTATGTGTTTAAAACGCAGATGGGCGAGATTTCGGTACACGCTGAAGAAC TCACTGTACTCTCAAAGAGCTTGAAGCCACTGCCCGTTGTGAAGTATAAAGACGGTGTGGCTTACGACAAGTTCGACGAC CCCGAACTTCGCTACCGCCGCAGATATATAGACTTGGTGGTGAACGATGGTGTGAAGGAAACATTTGAAAAGCGTGCCAC GGTGTTGAGAACCATGCGCCGTTTCTTCGACGATGCAGGTTACACCGAAGTGGAAACACCTACGCTGCAGACCATTGCGG GTGGTGCAAGTGCGCGTCCGTTCATCACACACTTCAATGCGTTGAACACGGAAATGTATATGCGCATTGCTACCGAGCTT TATCTGAAACGACTAATCGTGGGTGGCTTTGAAGGTGTTTACGAAATTGGCAAGAACTTCCGCAACGAAGGTATGGACCG TTTCCACAACCCAGAGTTTACTTGTATGGAACTTTACGTGCAATACAAGGACTATAACTGGATGATGGACTTTACCGAAA AGTTGATAGAAAAGATTTGCACAGAGGTGAACGGCAAGCCCGAAATACAAGTGGGCGACAACCTTATCAGTTTCAAGGCA CCGTTCCGCCGTCTTCCAATCCTCGATGCCATCAAGGAAAAAACAGGTTTCGACCTTTACGGAAAGTCGGAAGAGGAAAT ACGTAATATCGCTGTGAACGAGTTGAAGCTCGAAGGCATCGACAGCAGCTTTGGTAAAGGCAAGCTCATCGACGAAATCT TCGGCGAGTTCTGCGAAGGTACGTTCATACAACCGACCTTCATTATCGACTATCCGGTTGAGATGTCGCCACTTTCAAAG ATGCACCGCTCTAAGCCAGGACTTACCGAACGCTTCGAATTGTTTGCGAATGGTAAGGAAATTGCCAACGCTTACTCGGA GTTGAACGACCCTATCGACCAAGAAGAACGCTTCAAGGAGCAAATGCGATTGGCAGACAATGGCGACGACGAAGCAATGG TTATCGACCAAGACTTCCTGCGTGCCCTGCAATATGGTATGCCGCCAACATCGGGTATCGGCATCGGTATCGACCGTTTG GTAATGTTGATGACAGGACAAGAGTATATTCAAGAGGTTCTGCTCTTCCCGCAGATGAAGCCAGAAGCCAAAATGCCGCA AAGCAGCATAAAGGAATGGGCAGAGATAGGCGTGTCCGAAGATTGGGTTTACGTGTTGCGTAAGTGCGGTTTCAACCTCA TACAGAATATTAAAGAGGAGAAAGCGCAAGGCTTGCAGCAGAAACTTGGCGAGATAAACAAGAAATACAAGTTAGGATAC GACAAGCCATCGGTTGATGAAATTCAACACTGGATTGACAAAGCACAATAA Protein sequence : MNVLELSEQEIVRRQSLQELRNMGIDPYPAAEFPTNAYSTDIKAEFNEDEKREVIIAGRLMGRRVMGKASFAEIQDSKGR IQVYITRDELCPTENKDIYNVVFKKLLDIGDFIGIRGYVFKTQMGEISVHAEELTVLSKSLKPLPVVKYKDGVAYDKFDD PELRYRRRYIDLVVNDGVKETFEKRATVLRTMRRFFDDAGYTEVETPTLQTIAGGASARPFITHFNALNTEMYMRIATEL YLKRLIVGGFEGVYEIGKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMDFTEKLIEKICTEVNGKPEIQVGDNLISFKA PFRRLPILDAIKEKTGFDLYGKSEEEIRNIAVNELKLEGIDSSFGKGKLIDEIFGEFCEGTFIQPTFIIDYPVEMSPLSK MHRSKPGLTERFELFANGKEIANAYSELNDPIDQEERFKEQMRLADNGDDEAMVIDQDFLRALQYGMPPTSGIGIGIDRL VMLMTGQEYIQEVLLFPQMKPEAKMPQSSIKEWAEIGVSEDWVYVLRKCGFNLIQNIKEEKAQGLQQKLGEINKKYKLGY DKPSVDEIQHWIDKAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-103 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006299010.1 | lysine--tRNA ligase | VFG1668 | Protein | 1e-103 | 47 |
