Gene Information

Name : fecA (PflA506_1022)
Accession : YP_006322543.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : TonB-dependent outermembrane ferric citrate receptor FecA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1154107 - 1156443 bp
Length : 2337 bp
Strand : -
Note : Transducer; identified by similarity to SP:P13036; match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM PF07715; match to protein family HMM TIGR01783

DNA sequence :
ATGCCCCAGCACCCGACGCTTCTCGCCCGTACACTGCGCCAACTCCTGCTCGGTGCCAGCCTCAGCCTGACCACACTGCC
GGCGGTGATGGCAGCCGACGCCAAGGCGTACCACATCGCACCTACTACCCTGGAAGCGGCCCTGAATCAATTCGGTCGCG
AAGCCGGCGTGTTGGTGTCCTTCGGTTCCGCCGTGACGGCCGGGATGCAAAGCGCTGGGTTGTCGGGCAGCTACAGCGCT
GCCGAGGGCTTGCAAAAACTACTGGAAGGCACCGGCCTGCAAGCCCGCGCCGAGGGTGACAACGCCTACAGCCTGCAACC
GGCTGGCGCCCCTGCGACCCTGGAGCTGCAGACCTCCAACGTGGTCGGCGACTGGCTCGGTGACGCGGCGCAAACCAACG
TGTTCGAGCACCCCGGCGCCCGTGATGTGATCCGCCGCGAAGAATTCGAACGCCAGGGCGCCACTCAGGCTCGCGATGTG
CTCAACCGCATCCCCGGCGTCAACGCCCCGGACAACAACGGCACCGGTAGCCACGACATGGCGCTGAACTTCGGCATTCG
CGGGCTCAACCCGCGCCTGGCGTCGCGCTCCACCGTGCTGATGGATGGCATCCCGGTGCCCTTCGCGCCTTACGGCCAGC
CGCAACTCTCCTTTGCGCCGATCAGCATGGGCAATATGGACGCGGTGGATGTGGTACGCGGCGGCGGTGCGGTGCGCTAT
GGCCCGCAAAACGTCGGTGGCATCGTCAACTTCGTCACCCGTGCCATCCCGGATGCGCCGACGGTCAAGGGCGGTTTGCA
GACCGAGACCAGCCCCTCCTCCAGCCACGACGGCTTCAAGACCACCGGCAACTTGCTGGCCGGCGGCACTGCCGACAATG
GCTTGGGGGGCGCGCTGCTGTACTCCGGCACCCGCGGCGGCGACTGGCGCGAAAACAGCAACACGCGCATCGATGACCTG
ATCCTCAAGGGCAAATACCAACTGGACGACGCCAACAGCTTCAACGCCATGGCACAGTACTACGAAGGCCAGGCCGACAT
GCCGGGCGGTTTGAACGTCAAGGACTACAAGGCTGATCCGTACCAGTCCACCCGCCCGTATGACAAGTTCTGGGGCCGCC
GCACGATGTTCAACGTCGGCTACCGCTACGAGCAGGACCGCCGCGAATTCACGGTCAACAGTTTCTTCACCAAGACCCTG
CGCAGCGGCTACCTGGACCAAGGCAGCTTCCTGTCGCTGTCGCCACGGGAATATTGGGTACGCGGCCTGAAAACGCGCTT
CGCCCAGGGCTTCGATCTCGGCCCCACCAGCCATGAAGTGGGTGTGGGCTACCGCTACATCAATGAAGCCGGCCACGAAC
TGCGCTACCGCACGCCGATTGCCGCCAACCAGCAAATCCCCACCACCAACAGCCGCAACGACCGCGATACGCGCGGCGGC
ACCGAAGCCAATGCGTTCTTCATCGACGACCGCATCGACATCGGCAAGTGGACCCTCACCCCTGGCATTCGCTACGAGAT
GATCGAGTCCCAGCAGACCAACAACCTGAGCAACGTCAAATACAAGGGCGACTACAACACTGCCCTGCCGGCGCTGAATG
TGCTTTACCACCTCACCGACGACTGGAACCTGTACGCCAACACCGAAGGCTCGTTCGGCAGCGTGCAGTACAGCCAGATG
CCAAACCGTGTGAACAGTGGCGAAGTGAAACCGGAAAAAGCCCGCACCTGGGAACTCGGCACGCGCTATGACAATGGCAA
CCTGCGCGCGGAAATCGGTGCGTTCCTGATTAACTTCGACAACCAGTACGACAGCAACCAGACCAACGACACCGTGATCG
CCCGCGGTGAAACTCGCCACCAAGGCATCGAGTCGAGCATCAACTACGCCCTCGACGGCCTGAGCCCGGCGCTGGCAGGG
TTTGATGTGTACGCCACCTACGCCTATGTGGATGCGACCATCCGCGAAGACGGCCCGAACAAAGGCAACCGCGTGCCCTT
CTCCTCCAAGCACAAAGGCACCCTGGGCGTGGGTTACACCGAAGGCCCGTGGAAGCTGAATGTGGACAGCAACTACCAGA
GCAGCCAGTTCGCCGACAACGCCAACACCCAGGCCGAAAGCGCCGACGGTGCCAATGGACGCATCCCCGGCTACATGCTG
TTCAGCAGCCGCGCAGCCTATGACTTCGGCCCGCAGTTGTCGGATCTGAATGTGGCGGTGGGGGTGAAGAACATCTTCAA
CAAGCAGTACTACACCCGCTCGTTCGACGACAACAACAAGGGCAAGTACGTGGGTGAGCCGCGCACGGTGTATGTGCAAA
CCTCTATCGCGTTCTGA

Protein sequence :
MPQHPTLLARTLRQLLLGASLSLTTLPAVMAADAKAYHIAPTTLEAALNQFGREAGVLVSFGSAVTAGMQSAGLSGSYSA
AEGLQKLLEGTGLQARAEGDNAYSLQPAGAPATLELQTSNVVGDWLGDAAQTNVFEHPGARDVIRREEFERQGATQARDV
LNRIPGVNAPDNNGTGSHDMALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRY
GPQNVGGIVNFVTRAIPDAPTVKGGLQTETSPSSSHDGFKTTGNLLAGGTADNGLGGALLYSGTRGGDWRENSNTRIDDL
ILKGKYQLDDANSFNAMAQYYEGQADMPGGLNVKDYKADPYQSTRPYDKFWGRRTMFNVGYRYEQDRREFTVNSFFTKTL
RSGYLDQGSFLSLSPREYWVRGLKTRFAQGFDLGPTSHEVGVGYRYINEAGHELRYRTPIAANQQIPTTNSRNDRDTRGG
TEANAFFIDDRIDIGKWTLTPGIRYEMIESQQTNNLSNVKYKGDYNTALPALNVLYHLTDDWNLYANTEGSFGSVQYSQM
PNRVNSGEVKPEKARTWELGTRYDNGNLRAEIGAFLINFDNQYDSNQTNDTVIARGETRHQGIESSINYALDGLSPALAG
FDVYATYAYVDATIREDGPNKGNRVPFSSKHKGTLGVGYTEGPWKLNVDSNYQSSQFADNANTQAESADGANGRIPGYML
FSSRAAYDFGPQLSDLNVAVGVKNIFNKQYYTRSFDDNNKGKYVGEPRTVYVQTSIAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecA YP_006322543.1 TonB-dependent outermembrane ferric citrate receptor FecA VFG1047 Protein 0.0 64