Gene Information

Name : fecI (PflA506_1024)
Accession : YP_006322545.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1157473 - 1157961 bp
Length : 489 bp
Strand : -
Note : identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937

DNA sequence : 
TTGCAGCCGTCCAACCCCGTCGAAGTGTTGTACAACGACCATCACCACTGGCTCACCGGCTGGTTGCGACGCAAGCTCGG
CTGCCCGGAAAACGCCGCCGACCTGGCTCAGGACACCTTTATCCGCGTGCTCAGTGCCCGGGAAGCGCCAACGCTGATCG
AGCCGCGCGCCTTCCTCACCACCGTGGCCAAGCGCGTGCTGTTCAACTTCTACCGCCGCCAGGACCTGGAGCGCGCCTAC
CTCGAGGCCTTGGCTCAGATGCCCGAACACGTGGCACCGTCGGAAGAAGACCGCGCAATCATCCTGCAAACCCTGCTGGA
ACTGGACCAACTGCTCGACGGCTTGCCCAAGCAGGTCAAACGCGCTTTCCTGCTGGCCCAACTCGACGGCCTGACCTACG
CGCAAATCGGCGCGCAACTGGGCATCTCCATCGCCACCGTCAAACGCCACCTGACCAAAGCGGCCATGCGCTGCTACTTC
GCCCTATGA

Protein sequence : 
MQPSNPVEVLYNDHHHWLTGWLRRKLGCPENAADLAQDTFIRVLSAREAPTLIEPRAFLTTVAKRVLFNFYRRQDLERAY
LEALAQMPEHVAPSEEDRAIILQTLLELDQLLDGLPKQVKRAFLLAQLDGLTYAQIGAQLGISIATVKRHLTKAAMRCYF
AL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-31 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_006322545.1 RNA polymerase sigma factor FecI VFG1049 Protein 5e-32 53