Gene Information

Name : capB (PflA506_1265)
Accession : YP_006322783.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Unknown
Product : cold shock protein CapB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1428509 - 1428718 bp
Length : 210 bp
Strand : -
Note : identified by similarity to SP:P0A106; match to protein family HMM PF00313

DNA sequence :
ATGTCTAATCGCCAAACTGGTACCGTTAAGTGGTTCAACGATGAAAAAGGCTTCGGCTTCATCACTCCACAATCCGGTGA
CGACCTGTTCGTTCACTTCAAAGCTATCCAATCCGACGGCTTCAAAAGCCTGAAAGAAGGCCAACAGGTTTCTTTCATCG
CTACCCGCGGTCAGAAAGGCATGCAAGCTGAAGAAGTTCAAGTTATCTAA

Protein sequence :
MSNRQTGTVKWFNDEKGFGFITPQSGDDLFVHFKAIQSDGFKSLKEGQQVSFIATRGQKGMQAEEVQVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-15 59