Gene Information

Name : PflA506_0137 (PflA506_0137)
Accession : YP_006321681.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 164306 - 164815 bp
Length : 510 bp
Strand : +
Note : identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937

DNA sequence : 
ATGGGCATCGCGACTGACGGCCAGCAACAGCTTCACATCCTGTACCGCGACCATCACGGCTGGCTGCAAGGCTGGTTGCG
CAAGCGCCTGGGCGACCGTGAGCAGGCCGCCGATGTGGCGCAGGACACCTTCCTGCGCCTGCTGGTGGCCGGGCGTTTCC
CGGGTGACAAGGAAAGCCGCAGCTATTTGGCGCAGATCGCCCGTAACCTGGTGATCGACCTATGGCGCCGCCTGCGCATC
GAACGTGCGTACCTGGAAAGCATCGCGCACCTGCCCGAGCCCGAGTCGCCTTCCCTGGAAACCCGCGCGCTGATCCTCGA
AACCCTGATGCAGATCGACGCCATGCTCGACCGCATGCCCGACAATGTACGCCGTGCGTTTTTACTTTCGCAGTTCGAAG
GCTTGAGCTATGCGCAAATCGCCGAACGCCTGGGCGTCACCGTCAGCTCGGTGCAGAAGTACATGACCCGCGCCATCGTC
GCCTGCTACCAGGTGGTGTACGAAGAATGA

Protein sequence : 
MGIATDGQQQLHILYRDHHGWLQGWLRKRLGDREQAADVAQDTFLRLLVAGRFPGDKESRSYLAQIARNLVIDLWRRLRI
ERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMPDNVRRAFLLSQFEGLSYAQIAERLGVTVSSVQKYMTRAIV
ACYQVVYEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 6e-35 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PflA506_0137 YP_006321681.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 2e-35 44