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Name : ccmF (PflA506_1806) Accession : YP_006323311.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1969523 - 1971511 bp Length : 1989 bp Strand : + Note : identified by similarity to SP:P45404; match to protein family HMM PF01578; match to protein family HMM TIGR00353 DNA sequence : ATGACGTCCGCACTGTTTATTCCGGAGCTGGGCCAGTTGGCGATGATCCTCGCGCTGTGCTTTGCCGTGGTCCAGGCCGT GGTGCCCTTGCTCGGTGCCTGGCGCGGCGACCGCCTGTGGATGAGCCTGGCGCAGCCTGCCGCCTGGGGCCAGTTTGCCT TCTTGCTGTTCGCCTTTGGTTGCCTGACCTACGCCTTCATGACCGACGATTTTTCCGTCGCCTACGTCGCCAACAATTCC AACAGCGCTTTGCCCTGGTACTACAAGTTCAGCGCCGTGTGGGGCGCCCACGAAGGTTCATTGCTGTTGTGGGCCTTGAT CCTCGGCGGCTGGACCTTCGCTGTATCGGTGTTCTCGCGCCAATTGCCGCAAGTGATGCTGGCGCGGGTGCTGGCGGTGA TGGGCATGATCAGCATCGGCTTCCTGCTGTTTTTGATCATGACCTCCAACCCGTTCACCCGCATCCTGCCGCAGATCCCG GTGGACGGTCACGACCTCAACCCGTTGCTGCAGGATATCGGCCTGATCGTGCACCCGCCGATGCTCTACATGGGCTATGT GGGCTTTTCTGTGGCCTTCGCGTTCGCCATCGCCGCCTTGCTCGGCGGGCGTCTCGACGCCGCCTGGGCGCGCTGGTCAC GGCCATGGACCATCGTCGCCTGGGCCTTCCTCGGTATCGGTATCACCCTGGGCTCGTGGTGGGCCTATTACGAACTTGGC TGGGGCGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCCTCCTTCATGCCGTGGCTGGTGGGTACCGCGCTGATTCACTC CCTGGCCGTCACCGAAAAGCGTGGCGTGTTCAAGAGCTGGACGGTATTGCTCGCCATCGCGGCGTTTTCCCTCAGCCTGC TCGGCACTTTCCTGGTGCGCTCGGGCGTGCTGACCTCGGTGCATGCGTTTGCCTCAGACCCTGAGCGCGGCGTGTTCATC CTGATCTTCCTGCTGTTTGTGGTCGGCGGTTCCCTGACCCTGTTCGCCCTGCGTGCTCCGGTGGTCAAGAGCCACGTCGG TTTCAACCTGTGGTCGCGGGAGACCCTGTTGCTGGGCAATAACCTGGTACTGGTGGTGGCTGCATCGATGATCCTGCTCG GCACCCTCTACCCGCTGGTACTGGATGCCTTGAGCGGCGCCAAGCTGTCCGTGGGGCCGCCGTACTTCAATGCGTTGTTC ATCCCGTTGATGGGCCTGTTGATGGTAGTGATGGCGGTCGGCGTGCTGGTGCGCTGGAAAGACACCCCGGTGAAATGGCT GGCGGGCATGCTGATGCCGGTGTTGCTCGGCAGCGTGGCCCTGGCGGTGATCGCCGGGTTTGCCTACGGCGACTTCAATT GGGCGGTACTCGCCACCTTCCTGCTGGCGGCCTGGGTGTTGCTGGCGGGGGCGCGGGACATCGTCGACAAGACGCGCCAC AAAGGCCTGATCAAAGGCCTGCCCACTCTGACCCGCAGCTATTGGGGCATGCAGATCGCCCACATTGGTATTGCGGTGTG CGCCCTTGGGGTGGTGCTGTCCAGCCAGAACAGCGCCGAGCGCGACCTGCGCCTGGCGCCGGGCGAGTCCATGGACCTGG CCGGTTACCACTTCATCTTCGAAGGTGCCAAGCACTTTGAAGGGCCGAACTTCACCTCCGACAAAGGCACGGTGCGCGTG GTGCGCAATGGTAAGGAAATCGCCGTGCTGCACCCGGAGAAACGCCTGTACACCGTGCAAAGTTCGATGATGACCGAGGC TGGCATTGACGCAGGTTTCACCCGTGACCTGTATGTGGCCCTCGGTGAACCTCTGGGCGATGGCGCCTGGGCCGTGCGCG TGCATGTCAAACCGTTCGTGCGCTGGATCTGGTTCGGCGGGTTGCTCACCGGGTTCGGCGGGTTGCTCGCAGCGCTGGAC CGGCGCTATCGGGTCAAGGTCAAGAGCCGGGTGCGTGAAGCGCTTGGCCTTTCGGGAGCTGCGGTATGA Protein sequence : MTSALFIPELGQLAMILALCFAVVQAVVPLLGAWRGDRLWMSLAQPAAWGQFAFLLFAFGCLTYAFMTDDFSVAYVANNS NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISIGFLLFLIMTSNPFTRILPQIP VDGHDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFI LIFLLFVVGGSLTLFALRAPVVKSHVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALF IPLMGLLMVVMAVGVLVRWKDTPVKWLAGMLMPVLLGSVALAVIAGFAYGDFNWAVLATFLLAAWVLLAGARDIVDKTRH KGLIKGLPTLTRSYWGMQIAHIGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYHFIFEGAKHFEGPNFTSDKGTVRV VRNGKEIAVLHPEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALD RRYRVKVKSRVREALGLSGAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-136 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-124 | 55 |
