|
Name : PflA506_1995 (PflA506_1995) Accession : YP_006323483.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : TonB-dependent outermembrane ferric citrate receptor Function : - COG functional category : - COG ID : - EC number : - Position : 2178403 - 2180796 bp Length : 2394 bp Strand : + Note : Transducer; identified by similarity to SP:P13036; match to protein family HMM PF00593; match to protein family HMM PF07660; match to protein family HMM PF07715; match to protein family HMM TIGR01783 DNA sequence : GTGAAAAAACTTGCTCTTCACAACAATAAAATTTCCCGCTGGGCGCCCTTGGCCCTGGCCGTTGCCATCAGTACCGCACA GGCTGCCGAGGGCGTCCACATTCGTGCCCAATCCCTCGGCGCAGCCTTGAGCCAATTGGGCCAGCAGACCTCGCTGCAAG TGTTCTTCAGCCCCGATATGGTGGCTGGCAAGCAAGCTCCCGCGGTCGATGGCAACCTCTCGCCCGAACAAGCCCTGCGG CAATTACTGCAAGGCAGTGGCCTGGATTACCAGATTGACGCCGGCTCCGTGACCTTGCGTCCGGTGCGCAGCGGCACCGG TGAAGCGGGCTCACCGCTGGAACTGGGGGTCACCGATATCAAAGTGGTGGGCGACTGGCTTGCCGACGCCGATGCCGAAG TGGTGCAGAACCACCCCGGTGCGCGCACGGTTATTCGCCGCGAGGCCATGGTAGAGCAGGGCGCGATGAACGTCGGTGAT GTGCTGCGCCGTGTGCCTGGCGTGCAAGTGCAGGAATCCAACGGCACCGGCGGCAGTGATATTTCCCTCAACGTCGGTGT GCGCGGGCTGACGTCACGCCTGTCGCCGCGCTCCACCGTGCTGATTGACGGCGTACCGGCTGCGTTCGCTCCCTACGGCC AGCCACAGCTGTCGATGGCGCCAATTTCTGCCGGTAACCTGGAAAGTATCGACGTTGTCCGTGGCGCGGGTTCGGTGCGT TATGGGCCACAGAACGTCGGCGGCGTGATCAACTTCGTAACCCGTGCGATCCCGCAAGACTTCTCCGGGGAAGTCGGCAC CACCCTGCAAACGTCTGCCCACGGGGGCTGGAAGCATGTGGAAAACGCCTTTATCGGCGGCACGGCCGACAACGGTATCG GTGCCGCGCTGCTGTACTCCGGGGTCAATGGCAACGGTTACCGCAACAGCAACAACGGCAACGACATCGATGATGTGATC TTCAAGACCCACTGGGCGCCGACCGATCAAGACGATTTCTCGCTGAACTTCCACTATTACGATGCCAGCGCCGATATGCC CGGCGGCCTGACCCAGAAGCAGTTCGATGCCAACCCGTACCAATCGGTGCGTGACTGGGACAACTTCAGCGGGCGCCGCA AGGACATCTCCTTCAAGTACATCCGCCAGATCGACGACCGCACCCAGGCCGAAGTGCTGACTTACTATTCCGACAGTTTC CGTGGCAGCAACATTGCCAACCGCGACCTCAAGACCCTCAGTTCCTACCCGCGCACCTACTACACCTTCGGCATCGAGCC GCGTGTGTCCCATGTGTTTGACCTGGGGCCCAGTACCCAGGAAGTCAGCGTGGGCTATCGCTACCTCAAAGAAGGCATGC ACGAGGAGGCCACCAGCCTGAACCTGGTCAACAACGTACCGACGCCGGGCGGGCAGAGCGACGGTCACGTGTATCAGGAC CGCACGGGGGGCACTGAAGCCAACGCCTTCTATATCGATAACAAAATCGATATTGGCAAATGGACCATCACCCCGGGCAT TCGCTTTGAAGATATCCGTACCGAATGGCATGACCGCCCAGTCGTGGCCCTGAACGGCAAGCGTACAGAGGAAAAACGCC GCGAGGTCCACAACAACGAACCGCTGCCGGCGCTGAGCGTGATGTACCACGTGTCTGACGCCTGGAAACTGTTCGCCAAC TACGAAACCTCCTTCGGCAGCCTGCAGTATTTCCAACTGGGCCAGGGCGGTACCGGCGACCAGACGGCCAACGGCCTGAA CCCGGAAAAGGCCAAGACCTACGAGGTCGGTACGCGCTACAACGACAGCGTCTGGGGCGGCGAAGTGACGCTGTTCTACA TCGACTTCTCGGATGAACTGCAATACGTCAGCAATGACGTAGGCTGGACCAACCTCGGCGCCACCAAGCACAGCGGCATC GAAGCATCGGCCCATTACGACCTGTCCAACCTCGACCCGCGCCTCGACGGCCTGACCGCCAACGCGGGCTTCACCTACAC CAAGGCCACCTCCGAAGGTGATGTGCCGTTCAAGGGCCGCGACCTGCCACTGTATTCCCGCCAAGTGGCGACCCTGGGCC TGCGTTACGACGTCAACCACTGGACCCACAACCTGGATGTCTATGCCCAGTCCGGCCAACGGGCGCCAGGCACCGGAACC ACCTACATCACCCAAGGCACCGCGGATGGTCAATACGGTGATATCCCAGGGTATGTCTCGGTCAACGTGCGCAGCGGTTA TGACTTCGGCGCGCAGTTGTCGAACCTGAAGCTGGGTGTGGGCGTGAAAAACGTCTTCGACCAGCAGCATTACACGCGCT CCAGCGATAACAATGCCGGCTTGTACCTGGGCGAGCCTCGCACCTTCTTTGTACAGGCAAGCGTCGGGTTCTGA Protein sequence : MKKLALHNNKISRWAPLALAVAISTAQAAEGVHIRAQSLGAALSQLGQQTSLQVFFSPDMVAGKQAPAVDGNLSPEQALR QLLQGSGLDYQIDAGSVTLRPVRSGTGEAGSPLELGVTDIKVVGDWLADADAEVVQNHPGARTVIRREAMVEQGAMNVGD VLRRVPGVQVQESNGTGGSDISLNVGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISAGNLESIDVVRGAGSVR YGPQNVGGVINFVTRAIPQDFSGEVGTTLQTSAHGGWKHVENAFIGGTADNGIGAALLYSGVNGNGYRNSNNGNDIDDVI FKTHWAPTDQDDFSLNFHYYDASADMPGGLTQKQFDANPYQSVRDWDNFSGRRKDISFKYIRQIDDRTQAEVLTYYSDSF RGSNIANRDLKTLSSYPRTYYTFGIEPRVSHVFDLGPSTQEVSVGYRYLKEGMHEEATSLNLVNNVPTPGGQSDGHVYQD RTGGTEANAFYIDNKIDIGKWTITPGIRFEDIRTEWHDRPVVALNGKRTEEKRREVHNNEPLPALSVMYHVSDAWKLFAN YETSFGSLQYFQLGQGGTGDQTANGLNPEKAKTYEVGTRYNDSVWGGEVTLFYIDFSDELQYVSNDVGWTNLGATKHSGI EASAHYDLSNLDPRLDGLTANAGFTYTKATSEGDVPFKGRDLPLYSRQVATLGLRYDVNHWTHNLDVYAQSGQRAPGTGT TYITQGTADGQYGDIPGYVSVNVRSGYDFGAQLSNLKLGVGVKNVFDQQHYTRSSDNNAGLYLGEPRTFFVQASVGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecA | AAL08456.2 | FecA | Not tested | SRL | Protein | 2e-132 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PflA506_1995 | YP_006323483.1 | TonB-dependent outermembrane ferric citrate receptor | VFG1047 | Protein | 1e-132 | 43 |
