Gene Information

Name : PflA506_2219 (PflA506_2219)
Accession : YP_006323702.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : sigma factor regulatory protein, FecR/PupR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2388087 - 2389055 bp
Length : 969 bp
Strand : -
Note : identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773

DNA sequence : 
GTGCTCAGCCTGGGCAAGGAACCGCCGCTGCCCACCGACGCCCTTGAAGAGGCCGCCGAATGGCTGATGCGCCTGAGCGA
GAACGAATTGAGCGCCAGCGAACGCGCCGAGTGGGAGCGCTGGAAGGTCAGCAGCCCTGAGCGTGGCCGGGCTTGGGCGC
GCGCGCAATTGCTGCAAAGCAAGCTCGGTGGCCTGCCGCCGTCCCTGGCGATGTCGGCGCTGGACCGCCCGAGCAACCCC
CAACGCCGCGAAGCCCTGGGCAAACTGGCCTTGTTGCTGGCGGTAATGCCGGTGGGCTGGGGCAGCTGGAAACTGGCGCA
GTCCCAGCAATGGAGCGCCGACTACCGCACCCGCATCGGCGAACGTCGCGAACTGACCCTGGCCGACGGCTCGCGCCTGA
CCCTCAACACCGAGACCGCCATCGACGTGCGGTTCGACACCCAGCAACGCCTGGTGAGCCTGCGCGAAGGTGAAATACTG
GTGCAGACCGCACAGGATGCATCCCGCCCGTTCCTGGTCAGCACCCGCCAGGGCCATATGCACGCCCTGGGCACGCGTTT
TACCGTACGCGAACGGGGCGCACGCACGCATCTGGCGGTGCTTGAGGGCGCGGTCAAAGTGAAGCTGGCCGACAATAGCC
AGAGCGCGCCACTGATCGTCAGCGCCGGGCAACGCACGGATTTTTCCGCGCAACAGTTCGGCGCGCTCACCCCCGCCGAC
CGCAATATCAGCGCCTGGACCCAAGGCATGCTGATGGCCGACAACATGCGCCTGGCAGACTTTGTCGCGGAACTGACCCG
CTATCGGCGTGGCTTCGTGCGCTACGACCCGGCCATTGCAAACCTGCGTATTTCCGGGGCCTTCCCCATCGCCGATACCC
AGCGCACCTTGAACATGCTGGTGCAGACCTACCCGGTGCGCGCCAGCGGCCATTTGAACGGTTATTGGGTCAGCCTGTCG
CCGGCTTGA

Protein sequence : 
MLSLGKEPPLPTDALEEAAEWLMRLSENELSASERAEWERWKVSSPERGRAWARAQLLQSKLGGLPPSLAMSALDRPSNP
QRREALGKLALLLAVMPVGWGSWKLAQSQQWSADYRTRIGERRELTLADGSRLTLNTETAIDVRFDTQQRLVSLREGEIL
VQTAQDASRPFLVSTRQGHMHALGTRFTVRERGARTHLAVLEGAVKVKLADNSQSAPLIVSAGQRTDFSAQQFGALTPAD
RNISAWTQGMLMADNMRLADFVAELTRYRRGFVRYDPAIANLRISGAFPIADTQRTLNMLVQTYPVRASGHLNGYWVSLS
PA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecR AAL08457.1 FecR Virulence SRL Protein 1e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PflA506_2219 YP_006323702.1 sigma factor regulatory protein, FecR/PupR family VFG1048 Protein 7e-47 42