Gene Information

Name : rnhA (PflA506_2452)
Accession : YP_006323935.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Unknown
Product : ribonuclease HI
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 2674291 - 2674743 bp
Length : 453 bp
Strand : +
Note : identified by match to protein family HMM PF00075

DNA sequence :
ATGACCGATAGCGTAGAACTCTTCACCGATGGCGCCTGCAAGGGCAACCCCGGCCCGGGCGGCTGGGGCGCCTTGCTAGT
GTGCAAGGGCGTGGAGAAGGAATTGTGGGGCGGCGAAGCCAATACCACCAATAACCGCATGGAACTGATGGGCGCGATTC
GCGGCCTCGAAGAACTCAAGCGGCGCTGCAACGTACTCCTGGTGACCGACTCGCAGTACGTGATGAAGGGCATCAACGAG
TGGATGGTCAACTGGAAAAAACGTGGCTGGAAGACAGCGGCCAAGGAGCCGGTCAAGAACGCCGACCTGTGGCAATTGCT
CGATGAACAGTGCAACCGTCACGACATCACCTGGAAATGGGTACGCGGGCACATTGGGCACCCTGGCAACGAGCGCGCCG
ACCAGTTGGCCAACCGTGGCGTGGATGAAGTGCGCGGCTACAAGCAGAGCTGA

Protein sequence :
MTDSVELFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELMGAIRGLEELKRRCNVLLVTDSQYVMKGINE
WMVNWKKRGWKTAAKEPVKNADLWQLLDEQCNRHDITWKWVRGHIGHPGNERADQLANRGVDEVRGYKQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-36 59