Gene Information

Name : PflA506_0245 (PflA506_0245)
Accession : YP_006321788.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Resistance
Product : polar amino acid ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 287409 - 288155 bp
Length : 747 bp
Strand : -
Note : identified by similarity to SP:P37774; match to protein family HMM PF00005

DNA sequence :
ATGATCGTGGTTGAAAAACTGACCAAACAATTCAATGGTCAGGTGGTGCTCAACGGCATCGACCTGGAGGTCAAGGAAGG
CGAAGTGGTCGCCATCATCGGCCCCAGCGGTTCCGGCAAGACCACCTTCCTGCGCTGCCTGAACTTCCTCGAAGAACCCA
CCAGCGGCCGTATCAAGGTCGGTGACATCGAGATCGACAGCAGCAGGCCGCTCAACCAGCAACAGGGCCTGGTGCGACGC
CTGCGCCAGCATGTGGGCTTTGTGTTCCAGAACTTCAACCTGTTCCCCCACCGCACCGCGCTGGAAAACGTCATCGAAGG
CCCCATCGTGGTCAAGAAGATGCCACGGGAAGCGGCGGCCGAACTGGGGCGCAAGCTGCTGGCCAGGGTCGGCCTGGCGG
GCAAGGAAGCGTCCTACCCAAGGCGGCTGTCCGGCGGCCAGCAACAGCGTGTGGCGATTGCCCGCGCATTGGCCATGGAG
CCGGAGGTGATCCTGTTCGACGAACCCACCTCGGCCCTCGACCCGGAACTGGTGGGTGAAGTATTGGCGACCATTCGCAG
CCTGGCCGAAGAAAACCGCACCATGGTCATCGTCACGCACGAGATGAGCTTTGCCCGTGATGTGGCCAACCGGGTGATCT
TTTTCGACAAGGGCGTGATCGTCGAACAGGGCGAAGCCAAGGCGCTGTTTGCCAACCCCAGGGAAGAACGTACCAAGCAG
TTCCTGAGCAAATTCCTCGCCCACTGA

Protein sequence :
MIVVEKLTKQFNGQVVLNGIDLEVKEGEVVAIIGPSGSGKTTFLRCLNFLEEPTSGRIKVGDIEIDSSRPLNQQQGLVRR
LRQHVGFVFQNFNLFPHRTALENVIEGPIVVKKMPREAAAELGRKLLARVGLAGKEASYPRRLSGGQQQRVAIARALAME
PEVILFDEPTSALDPELVGEVLATIRSLAEENRTMVIVTHEMSFARDVANRVIFFDKGVIVEQGEAKALFANPREERTKQ
FLSKFLAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PflA506_0245 YP_006321788.1 polar amino acid ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 1e-27 42