|
Name : PflA506_2778 (PflA506_2778) Accession : YP_006324255.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : sigma-70 family RNA polymerase sigma factor Function : - COG functional category : - COG ID : - EC number : - Position : 3067329 - 3067880 bp Length : 552 bp Strand : - Note : identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937 DNA sequence : GTGAACAACGGAGCGTTCGCGTCCACGCAGCAATTTGAAAAGCTCTATGTCGACCATCACGGTTGGCTATGCAGCCTGTT GCGCCGCAAGTTGGGCAGCTCGGTCGATGCCGCTGATCTCGCTCACGATGTCTATCTCAATCTCATCAAGAAAGGCCGGG TTCCTTCCACCGAGGATTCTCGCGCCCACCTGACCCAAATCGCCAAAGGCATGGTGATCGATCTTTATCGCCGACGTCAT CTTGAAGCCCGCCATCTGGAGGCGCTCAAGTTGCAGGCCGAACTGTTGGTCCCGTCAGAGGAGCGACGTGCCCTCGTGAG TGAAGCGCTGGCTCAGATCGATGACGCATTGCGCCGCAAGCCAGCCAAAACCCGCCAAGCGCTGCTGCTGTGCAAGTTGC ATGGTATGGGCCACCGCGACATTGCCTGCGAGTTGAAAGTGTCGGTGTCTTCCGTCGAGAAGTACATCGCGTCTGGCCTG CGAGCCTGCTACCCATTCGTGCCCGGGCTGGTGCCTGGCACCGCCTCATCGATTAATGAACGTCTCGATTGA Protein sequence : MNNGAFASTQQFEKLYVDHHGWLCSLLRRKLGSSVDAADLAHDVYLNLIKKGRVPSTEDSRAHLTQIAKGMVIDLYRRRH LEARHLEALKLQAELLVPSEERRALVSEALAQIDDALRRKPAKTRQALLLCKLHGMGHRDIACELKVSVSSVEKYIASGL RACYPFVPGLVPGTASSINERLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 2e-24 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PflA506_2778 | YP_006324255.1 | sigma-70 family RNA polymerase sigma factor | VFG1049 | Protein | 7e-25 | 42 |
