Gene Information

Name : capA (PflA506_3459)
Accession : YP_006324916.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Unknown
Product : cold shock protein CapA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3866658 - 3866870 bp
Length : 213 bp
Strand : +
Note : identified by similarity to SP:P72188; match to protein family HMM PF00313

DNA sequence :
ATGTCTAATCGCCAAACCGGCACCGTTAAATGGTTCAACGATGAAAAAGGCTTCGGCTTCATCACTCCTACAGGTGGCGG
TGACGACTTGTTCGTACACTTCAAAGCTATCGAAAGCGACGGTTTCAAAAGCCTGAAAGAAGGCCAAACCGTGTCCTTCG
TGGCTGAGAAAGGCCAAAAGGGTATGCAAGCTGCACAGGTTCGCGGCGAGTAA

Protein sequence :
MSNRQTGTVKWFNDEKGFGFITPTGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQAAQVRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 6e-16 60