|
Name : PflA506_4132 (PflA506_4132) Accession : YP_006325553.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : sigma-70 family RNA polymerase sigma factor Function : - COG functional category : - COG ID : - EC number : - Position : 4559939 - 4560460 bp Length : 522 bp Strand : - Note : identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937 DNA sequence : ATGTCCGGCGCCGATCGTGCTCACAGCGACTATGTGGGCTCCCTGTTTCGCATTCATTACCCTTGGCTGTGCAGCCGTTT GCACCGCCACCTCAACTCCCGTGCCCACGCCGAAGACATCGCCGTCGACGCGTTTGTCCAGCTCTTGAGTGCACCTCAGG TAGCGCCGATACGACAGCCCCGCGCATTGCTTACCACTATTGCCCAGCGCCTGGTGTACCAGGTGTGGCGTCGACGTGAC CTGGAGCGTGCCTACCTCGCTACGCTGGATAACGATGCGGCCTGCGCGGAGGGCAGGGCCCGAGTGCTCGAAGCGCTGCA GGCCGTCGAGCAGACGCTCGACCGCTTGCCGGCCAAGGTCAAGGCGACGTTCCTGCTGTCCCGCGTCAACGGCCTGACGT ACCCCCAGATCGCCGCCGAACTGGGGATTTCCCAGCGCTCGGTCAGTGACTACATGGCCCGCGCTGTTACCGGACTTGAA TCCCACCCCGATCAAATGTGGGAGCTGGCTTGCCTGCGATAG Protein sequence : MSGADRAHSDYVGSLFRIHYPWLCSRLHRHLNSRAHAEDIAVDAFVQLLSAPQVAPIRQPRALLTTIAQRLVYQVWRRRD LERAYLATLDNDAACAEGRARVLEALQAVEQTLDRLPAKVKATFLLSRVNGLTYPQIAAELGISQRSVSDYMARAVTGLE SHPDQMWELACLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 2e-25 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PflA506_4132 | YP_006325553.1 | sigma-70 family RNA polymerase sigma factor | VFG1049 | Protein | 8e-26 | 43 |
