Gene Information

Name : PflA506_5432 (PflA506_5432)
Accession : YP_006326815.1
Strain : Pseudomonas fluorescens A506
Genome accession: NC_017911
Putative virulence/resistance : Virulence
Product : sigma factor regulatory protein, FecR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5954790 - 5955734 bp
Length : 945 bp
Strand : +
Note : identified by similarity to SP:P23485; match to protein family HMM PF04773

DNA sequence : 
ATGGTCAGCCCTGACCGCAAGGCGTTCGAGGTCGCTGCCAGTTGGTATGTGCAATTCCAGTCGCAATCACCGACGCCCGC
ACAACATCAAGCCTGGCAGCAGTGGCTTAATCATGACCCGTCCCACCAGGCGGCTTGGGACCAGATGGAGCAGTTGCAAC
GCAGCCTCGGTGGCCTGCCCCCTGATCTCACACGCCGCGCGTTATCCACCACGCAACAGCGGCGCCAGGTACTCAAGTGG
ATGCTGGTGCTTGGCGGCAGTGGCTACCTGGGCTGGAACGTCCAGCAACATACGTCGTTGGGTAACGCATGGGCTGATTA
CCGCACGTCGGTGGGCCAGAGGCGGCGCATCGAGTTGGCGGATGGCACGCAGATCAATCTCAATACTCATACCGCTATCG
ATGTGGCCTTTGACGGGTACCAACGTTTGATCCGTCTGCGCGAGGGTGAAGTACTTATCCACACCGGCACGCGGGGTGGG
CACTTACCGTTTTATGTAGAAACTCGCCAAGGCCGGGTCAAGGCGCTGGGCACTCGGTTTACTGTGCGCCAACTGCCGGA
TGCCACGCGGGTGGGCGTCTTGGAAGAACGGGTTGAGATATCCCCCGGCGACCAACCCGAACTTCGCCGCACTATGGGCG
CGGGTGAGAGCGCAGAGTTTGATCGGCACAATGTGCGCCCTGCCCAGCGATATGGCGGTGTACAGGCCGCCTGGGTCGAT
GGCCAACTGATCGTGCTCGATGCTCGGCTAGGAGAAGTTATCGATGAGTTGGCGCGCTATCGGCCGGGCGTATTGCACTG
CGACCCAGCCTCTGCGGGCCTACGCGTTTCCGGGACATTCCGTCTGGACTCAACCGATGCCGTCCTCGCTAACCTGCAAG
CGAGCCTGCCGATTCAAGTGAAATACTTTACGCGCTATTGGGTGTCGGTCACCCGGATCGGCTAA

Protein sequence : 
MVSPDRKAFEVAASWYVQFQSQSPTPAQHQAWQQWLNHDPSHQAAWDQMEQLQRSLGGLPPDLTRRALSTTQQRRQVLKW
MLVLGGSGYLGWNVQQHTSLGNAWADYRTSVGQRRRIELADGTQINLNTHTAIDVAFDGYQRLIRLREGEVLIHTGTRGG
HLPFYVETRQGRVKALGTRFTVRQLPDATRVGVLEERVEISPGDQPELRRTMGAGESAEFDRHNVRPAQRYGGVQAAWVD
GQLIVLDARLGEVIDELARYRPGVLHCDPASAGLRVSGTFRLDSTDAVLANLQASLPIQVKYFTRYWVSVTRIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecR AAL08457.1 FecR Virulence SRL Protein 3e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PflA506_5432 YP_006326815.1 sigma factor regulatory protein, FecR family VFG1048 Protein 2e-51 41