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Name : rscT (PflA506_0704) Accession : YP_006322233.1 Strain : Pseudomonas fluorescens A506 Genome accession: NC_017911 Putative virulence/resistance : Virulence Product : type III secretion protein RscT Function : - COG functional category : - COG ID : - EC number : - Position : 820540 - 821328 bp Length : 789 bp Strand : + Note : identified by similarity to GB:CAY46986.1; match to protein family HMM PF01311; match to protein family HMM TIGR01401 DNA sequence : GTGCTGCTTTATCTTGACTACCTGCCCAGCCTGGTGATTGGCATGGCGCGTATTTACCCCTGTGGCATTTTGGTGGCGGC GTTTTGTTTTCAGCACGTGCGAGGCCTGCCTCGGCACACCATCGTGATGGTCCTGGCGCTGCTGCCCGCGCCGGGTATTC ACGCAGCTTTGGCAGGGCAGGACCCTTCAGCAATCATGCTCGGTGCGCTGATGATCAAGGAAGTGGTCCTGGGGTTGCTG CTCGGGGTGTTGCTGGCGATGCCGTTCTGGATGTTCGAGTCGGTCGGGGCGCTGCTGGACAACCAGCGTGGAGCCTTGGC AGGTGGCCAACTTAACCCGTCACTGGGGCCGGACGCGACACCGATCGGGCACATGTTCAAGCAACTGGCGATTTACCTGT TGATGGCCGTTCTGGGGTTGGGCACGCTGACCCAGGTGATCTGGGACAGTTATCTGATCTGGCCACCCACCGTGTGGTTT CCGTTTCCAGCGGCTGATGGCATGAGCGTATTTGTCGGGATGCTGAGTGACACGTTCATGCACATGATGCTTTACGCTGC GCCCTTTATTGCCGTGTTGTTGCTGTTGGAGTTTGGCATCGCGTTGCTGGGCGTCTACAGCCAGCAATTGCAAGTGAGTA CCTTGGCGCCACCGGTCAAATGCCTGGCGGGAATCGGTATTTTGTTGCTGTACTTTGCATTGTTGCAGGATCTTATTGTC GGGCGTATGAGCCAGCTGGGTGACCTTAAGCACTATCTGGGGCTTTTGTTCTCGGTCTCGGCATCGTGA Protein sequence : MLLYLDYLPSLVIGMARIYPCGILVAAFCFQHVRGLPRHTIVMVLALLPAPGIHAALAGQDPSAIMLGALMIKEVVLGLL LGVLLAMPFWMFESVGALLDNQRGALAGGQLNPSLGPDATPIGHMFKQLAIYLLMAVLGLGTLTQVIWDSYLIWPPTVWF PFPAADGMSVFVGMLSDTFMHMMLYAAPFIAVLLLLEFGIALLGVYSQQLQVSTLAPPVKCLAGIGILLLYFALLQDLIV GRMSQLGDLKHYLGLLFSVSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcT | NP_791220.1 | type III secretion protein HrcT | Virulence | Hrp PAI | Protein | 7e-53 | 54 |
| hrcT | AAG33886.1 | HrcT | Virulence | Hrp PAI | Protein | 6e-53 | 54 |
| hrcT | ABQ88361.1 | HrcT | Virulence | Hrp PAI | Protein | 4e-52 | 53 |
| hrpX | AAB05077.1 | HrpX | Virulence | Hrp PAI | Protein | 4e-52 | 53 |
| hrcT | AAT96148.1 | HrcS | Virulence | T-PAI | Protein | 2e-52 | 53 |
| hrcT | AAT96202.1 | HrcT | Virulence | T-PAI | Protein | 2e-52 | 53 |
| hrcT | AAT96345.1 | HrcT | Virulence | S-PAI | Protein | 5e-52 | 53 |
| hrcT | ABA47281.1 | HrcT | Virulence | S-PAI | Protein | 4e-53 | 53 |
| hrcT | AAT96264.1 | HrcT | Virulence | S-PAI | Protein | 7e-52 | 52 |
| hrcT | AAT96305.1 | HrcT | Virulence | S-PAI | Protein | 7e-52 | 52 |
| hrcT | AAB06007.1 | HrcT | Virulence | Hrp PAI | Protein | 4e-43 | 50 |
