Gene Information

Name : MYA_5187 (MYA_5187)
Accession : YP_006336266.1
Strain :
Genome accession: NC_017922
Putative virulence/resistance : Virulence
Product : Osmosensitive K+ channel histidine kinase KdpD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 147209 - 148702 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCTGAATCTGACCCAGCGGCTGTCGTGCGTGTTCGCGGTGCTGCTGCTCGCGTGTTCGGGCGCGTCCGCGTGGCT
GCAGATCCGCGCGAACGACATGCGAGAGAAGGAAGTCGTGCAGGCGCTGTCGCGCGATCTCGCTGCGCACATCGCCAGCA
GCACGCCGCTGATGGACGCGAACGGCCTGCGCCCGGATGCCGTGCGCCGGCTGTTCGGTCAGCTGATGGGCGTGAACCCG
AGCGTCGAGGTCTACCTGCTCGACAACGCGGGACGCATCGAGGGCGACGACGCGCCGCCCGGGCACGTGAAGCGCACCCG
CGTCGATCTCGCGCCGGTGCAGCGCTTCATCGCGGGCGAGCCGCTGCCGATCCTCGGCGACGATCCGCGCAGCATCGACG
CGCGCAAGGTGTTCAGCGCCGCGCCGCTGCAGCGCGCCGGGCAGCCGCCGTCCGGCTACGTCTACGTGGTGCTGCTCGGC
GAAGCGCACGACCGGCTGGCCGCGCGCGTCGACGCCGGCAACGTGCTGCGCACGACGCTGTGGTCGATGGCGGTCGTCGC
GCTGCTCGGGCTGGTGGCCGGCCTGATCGCGTTCAGCTTCATCACGCGGCCGCTGCGCCGGCTGACCGACGCGATGCGCC
GCTTCGACGCGAACGGCGCGCCCGACACGCAGCCGCCGCTGCCGCGCCCCGCGCCGGGACGCCGCGGCGACGACCTCGCG
GTGCTCGAATCCGCGTTCGCGCAGATGGCCGACCGGATCGGCGAGCAGTGGCGCGCGCTGACGCGTCAGGACCAGCAGCG
GCGCGAGCTGATCACGAACATCTCGCACGATCTGCGCACGCCGCTGACCTCGCTGCACGGCTATCTGGAAACGCTGTCGC
TGAAGGCCGACACGCTCGCCGACTCTGAGCGCCGCCGCTACCTGTCGGTCGCGCTCGCGCAGAGCACCAAGGTCGGGCGG
CTCGCGCAGGCGCTGTTCGAGCTGGCGCGGCTCGAGTCGGGCAGTGTGCAGGCCGAGCGCGAGCCGTTCTCGCTCGTCGA
TCTCGTGCAGGACGTCTTCCAGAAGTTCGAACTCGCGGCCCAGTCGCGCGGCATCGCGCTGCAGGCGCGCATCCCGCCGC
GCGTGCCGGCCGTGTCGGCCGATCTCGCGATGATCGAGCGCGTGCTGACCAATCTGCTCGACAACGCATTGCGGCACACG
CCGCAGCACGGCGCAATCGAAGTCGCGCTGACGCCGCGCGACGACCGCGTGGTGGTGACCGTGTCGGACACCGGCGAAGG
GATCCCGCTGGCGCGCCGCGCAGGATTGTTCCAGCGACCGCAGCGGCCCGCCAGCGGCGGCATGGCGACGAACGGCGGCC
TCGGCCTGCTGATCGTGCACCGGATGCTGGCGCTCAACGGCAGCGACATCCGGCTCGTCGACCGGGACGGGCGCGGCGCG
GTGTTCGAGTTCGCGCTCGCGATCGCGCAGCCGGCGCCCGGCGACCCGCAGTGA

Protein sequence :
MKLNLTQRLSCVFAVLLLACSGASAWLQIRANDMREKEVVQALSRDLAAHIASSTPLMDANGLRPDAVRRLFGQLMGVNP
SVEVYLLDNAGRIEGDDAPPGHVKRTRVDLAPVQRFIAGEPLPILGDDPRSIDARKVFSAAPLQRAGQPPSGYVYVVLLG
EAHDRLAARVDAGNVLRTTLWSMAVVALLGLVAGLIAFSFITRPLRRLTDAMRRFDANGAPDTQPPLPRPAPGRRGDDLA
VLESAFAQMADRIGEQWRALTRQDQQRRELITNISHDLRTPLTSLHGYLETLSLKADTLADSERRRYLSVALAQSTKVGR
LAQALFELARLESGSVQAEREPFSLVDLVQDVFQKFELAAQSRGIALQARIPPRVPAVSADLAMIERVLTNLLDNALRHT
PQHGAIEVALTPRDDRVVVTVSDTGEGIPLARRAGLFQRPQRPASGGMATNGGLGLLIVHRMLALNGSDIRLVDRDGRGA
VFEFALAIAQPAPGDPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-86 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MYA_5187 YP_006336266.1 Osmosensitive K+ channel histidine kinase KdpD VFG1701 Protein 3e-86 42