Gene Information

Name : Y1U_C1250 (Y1U_C1250)
Accession : YP_006340364.1
Strain : Streptococcus thermophilus MN-ZLW-002
Genome accession: NC_017927
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1215245 - 1216003 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
ATGACATTACTAGATGTTCAACATGTTAAAAAAATTTATAAAACGCGTTTCAAAGGAAATCAAGTTGAAGCCCTTAAAGA
TATCCATTTTACGGTTGATAAAGGTGACTATGTTGCAATCATGGGTGAGTCCGGGTCAGGAAAATCAACCTTGCTTAATA
TCCTTGCCATGCTTGATAAACCAACAGCAGGGCGTGTCTATCTGAATGGTATGGACACAGCAAGAATTAAAAATAAGGAT
GCTTCCAGTTTCCGTCGTGAAAGATTAGGATTTGTTTTCCAGGATTTCAATCTTTTAGATACCCTATCTGTTAAAGATAA
TATCTTGCTACCTTTGGTCCTTTCTCGATGCTCAGTTAAGCAAATGATGACACAAGTTGAAGCTATCAGTCGTCAACTGG
GAATTCACTCTTTGCTAGAGAAGTACCCTTATGAAATTTCAGGTGGCCAAAAACAAAGGGTTGCAGTTGCGCGTGCGATC
ATCACTAAACCAGAAATCCTCTTAGCAGATGAGCCAACAGGCGCCTTGGATTCCAAATCTTCAGCGGCACTCTTGGATGT
CTTTGATACTATTAATGCCAGCGGTCAGACCATTCTTATGGTAACTCACTCAACATCGGCCGCCAGTCGAGCGCAGCGTG
TTTTGTTTATCAAGGATGGTATTCTTTATAATCAAATCTTCAAAGGGGATAAGTCTGAACATCAAATGTTCCAAGAAATT
TCCGATACACTTACAGTAATGGCAAGTGAGGTGAACTAA

Protein sequence : 
MTLLDVQHVKKIYKTRFKGNQVEALKDIHFTVDKGDYVAIMGESGSGKSTLLNILAMLDKPTAGRVYLNGMDTARIKNKD
ASSFRRERLGFVFQDFNLLDTLSVKDNILLPLVLSRCSVKQMMTQVEAISRQLGIHSLLEKYPYEISGGQKQRVAVARAI
ITKPEILLADEPTGALDSKSSAALLDVFDTINASGQTILMVTHSTSAASRAQRVLFIKDGILYNQIFKGDKSEHQMFQEI
SDTLTVMASEVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y1U_C1250 YP_006340364.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 6e-40 44
Y1U_C1250 YP_006340364.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-36 42
Y1U_C1250 YP_006340364.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-38 42