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Name : clpB (TMO_0384) Accession : YP_006369807.1 Strain : Tistrella mobilis KA081020-065 Genome accession: NC_017956 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 404822 - 407419 bp Length : 2598 bp Strand : + Note : - DNA sequence : ATGAATATCGAGAGCTATACCGATCGGGCAAAGGGTTTCCTCCAGGCGGCCCAGCAGCTGGCGCAGGGCCGGGGGCATCA GCAGTTCACGCCCGAACATCTTCTGAAGGTCCTGGTCGATGACGAGCAGGGCGTGGGGCTGGGTCTGGTGCAGGCCGCGG GCGGTGACCCCGCGAAGCTGCGCGAGGCGGCCGAGCGCGCGCTCACCCGCCTGCCCAAGGTCGAAGGCAGCGGTGCCGGC CAGCTTTATCTGGCGCCGGATACCGGCCGCGTGTTCACCGAGGCCGAGGCCCTGGCCAAGCGGCTGGAAGACGAGTATGT CGCGGCCGAGACCCTTCTGCTCGCGCTCGCCCTGGTCGACCGGACCGAGGCGCAGAAGGCGCTGGCATCGGCCGGCGTCA AGCCGCAGGCGCTGGAGGCCGCGATCCGCGACATGCGCAAGGGCCGCAAGGTCGACAGCGCGCAGGCGGAGCAGGGCTAT GACGCGCTCAAGAAATATGCCCGCGACCTCACCCAGGCGGCGCGGGACGGCAAGCTCGACCCGGTGATCGGCCGCGACGA AGAGATCCGCCGCACCATCCAGGTGCTCAGCCGCCGCACCAAGAACAATCCGGTGCTGATCGGCGAGCCCGGCGTCGGCA AGACCGCCATCGTCGAGGGGCTGGCGCTGCGCATCATCAATGGCGACGTGCCCGAGAGCCTGCGCAGCAAGAAGGTGCTG GCGCTTGATCTGGGGGCGCTGGTCGCCGGTGCCAAATATCGGGGTGAGTTCGAAGAGCGGCTGCGCGCCGTGCTGCAGGA GATCGATGCGGCGGCGGGCGAAGTGGTGCTGTTCATCGACGAGCTGCACACCCTTGTGGGGGCGGGTGCAGCCGAAGGCT CGATGGATGCCTCCAACCTTCTGAAGCCGAAGCTGGCCCGGGGCGAGCTACGCTGCATCGGTGCCACCACGCTCGACGAG TATCGCAAACATATCGAGAAGGATGCCGCACTCGCCCGGCGCTTCCAGCCGGTGATGGTCGAAGAACCGACGGTGGCCGA GACCATCTCGATCCTGCGTGGCCTGAAGGAGCGCTACGAGCTTCATCACGGCGTGCGGATCACCGATGCCGCGGTGGTGG CGGCGGCGACGCTGTCGAACCGCTACATCACCGACCGTTTCCTGCCCGACAAGGCGATCGACCTGGTCGACGAGGCGGCG AGCCGGCTGCGCATCGAGATCGAGAGCAAGCCCGAGGCGATCGACGAGCTCGACCGCCGGCTGATCCAGCTCAAGATCGA GCGTGAGGCGCTGAAGCGCGAAAGCGATCAGGCGTCGAAGGACCGGCTGGTCAAGCTGGAAGGTGAGATTGCCGGTCTGG AGAAGCAGACCGCCGACATGACTGCGTCCTGGAAGGCCGAGAAGGGCCGCCTGGAAGGTGTGCAGAAGCTGAAGGAGGAG TTGGACCAGCTGCGGCTGGAGCTTGCCAACGCCCAGCGGCGCGGTGACCTGGCCAAGGCCGGTGAGCTGGCCTATGGCCG GATCCCCGAACTGGAGCGGAAGCTGAAGGCAGCCGAGGAGCAGGTGAAGAGCCGGCTGCTCGACGAGGCGGTGACCGACG GCCATATCGCGGCGATCGTCTCGCGTTGGACCGGCGTGCCGGTGGACAAGATGCTGGAAGGCGAGCGGGCCAAGCTGCTG CGCATGGAGCAGGTGCTGGGCGAGCGCGTCATCGGCCAGGCAGAGGCGGTCGCGGCGGTCTCCGAAGCGGTCCGGCGTGC CCGTGCCGGGCTGCAGGATCCTCGCCGGCCGATCGGCTCCTTCCTGTTCCTTGGCCCGACCGGCGTCGGCAAGACCGAGC TGTCGAAGGCGTTGGCGCAGTTCCTGTTCGACGACGACGCGGCGCTGCTGCGCATCGACATGTCGGAGTTCATGGAGAAG CACGCCGTCTCGCGGCTGATCGGCGCCCCTCCGGGCTATGTCGGCTATGACGAAGGTGGTGTGCTGACCGAGGCGGTGCG TCGGCGTCCCTATCAGGTGATCCTGTTCGACGAGGTGGAAAAGGCCCATCCGGACGTATTCAACGTTCTGCTGCAGGTTC TGGACGACGGTCGGCTGACCGATGGTCAGGGACGGACGGTCGACTTCACCAACACGGTCATCATCCTGACCAGCAATCTG GGCGCCGAGGTTCTGGCGGGCCAGGAGCCGGGTGCGCCGGCCGAAGACGTCCGGGCGCAGGTGATGGCGGTGGTCCGTGC GGCCTTCCGTCCGGAATTCCTCAACCGGCTGGATGAGATTATCCTGTTCCACCGGCTCGGCCGCGAGCATATGGGCGGGA TCGTCGACATCCAGATCACCGATCTGGTCAAGCGGCTGGCCGAACGGCAGATCGGCTTCGATCTCAGCCCTGCCGCCCGC GACTGGCTGGCTGATGCCGGCTATGACCCGGTCTATGGTGCCCGGCCGCTGAAGCGGACCATCCAGCGCGAGGTGCAGAA CCCGCTTGCGCGCATGGTGCTGGAAGGCCGGCTGCCCGAGGGTTCGACGGTTCGGGCGGATGTCCGGGACGGCGCGCTGG TCTTCGAGACCAGCACGCCTGAAGCGGCGGCGGCCTGA Protein sequence : MNIESYTDRAKGFLQAAQQLAQGRGHQQFTPEHLLKVLVDDEQGVGLGLVQAAGGDPAKLREAAERALTRLPKVEGSGAG QLYLAPDTGRVFTEAEALAKRLEDEYVAAETLLLALALVDRTEAQKALASAGVKPQALEAAIRDMRKGRKVDSAQAEQGY DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIINGDVPESLRSKKVL ALDLGALVAGAKYRGEFEERLRAVLQEIDAAAGEVVLFIDELHTLVGAGAAEGSMDASNLLKPKLARGELRCIGATTLDE YRKHIEKDAALARRFQPVMVEEPTVAETISILRGLKERYELHHGVRITDAAVVAAATLSNRYITDRFLPDKAIDLVDEAA SRLRIEIESKPEAIDELDRRLIQLKIEREALKRESDQASKDRLVKLEGEIAGLEKQTADMTASWKAEKGRLEGVQKLKEE LDQLRLELANAQRRGDLAKAGELAYGRIPELERKLKAAEEQVKSRLLDEAVTDGHIAAIVSRWTGVPVDKMLEGERAKLL RMEQVLGERVIGQAEAVAAVSEAVRRARAGLQDPRRPIGSFLFLGPTGVGKTELSKALAQFLFDDDAALLRIDMSEFMEK HAVSRLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFTNTVIILTSNL GAEVLAGQEPGAPAEDVRAQVMAVVRAAFRPEFLNRLDEIILFHRLGREHMGGIVDIQITDLVKRLAERQIGFDLSPAAR DWLADAGYDPVYGARPLKRTIQREVQNPLARMVLEGRLPEGSTVRADVRDGALVFETSTPEAAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-93 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-91 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-91 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006369807.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 2e-98 | 44 |
| clpB | YP_006369807.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2076 | Protein | 2e-105 | 42 |
