Gene Information

Name : TKWG_12310 (TKWG_12310)
Accession : YP_006379609.1
Strain : Advenella kashmirensis WT001
Genome accession: NC_017964
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2135228 - 2135755 bp
Length : 528 bp
Strand : -
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence : 
ATGGCCGGTAGCCAGTCAGTTTTGCAGCGGGAAATCCATATCCTTTACCAGGATCATCATGGATGGCTGTACCAATGGCT
GCACAGAAAACTGGGTAACCGCTTTGATGCAGCCGACCTTGCCCAAGACACATTTATGCGGGTATTGGCTGGGTATCGGC
AAGATACAATTCCGGTGCTCGATGAGCCCCGTGCCTACCTGACGACCGTCGCCAAGCGCCTGCTGATCAATTTTTATGAA
CGGCAGTCGCTGGAGCGTGCCTACGAGGCATCGTTATCGTTGCTGCCACAGCAGCATGTGCCTGGCCTGGAAGAGCGTGC
GATTCTTCTGGAAACATTGCAGGAGCTTGATGGGCTGCTGGATGCATTACCCGCTCGCGTGCGCACGGCGTTTCTGCTAT
GTCAACTCGAGGGTATGAGCTACGAGCAAATTGCGGCACATCTACAGGTGAGTGTACGTACAGTTACGCGCTACATGGCG
CAAGGTTTCAAACAATGCCTCACCTTGATGCTGACGCAAGCGGCGTGA

Protein sequence : 
MAGSQSVLQREIHILYQDHHGWLYQWLHRKLGNRFDAADLAQDTFMRVLAGYRQDTIPVLDEPRAYLTTVAKRLLINFYE
RQSLERAYEASLSLLPQQHVPGLEERAILLETLQELDGLLDALPARVRTAFLLCQLEGMSYEQIAAHLQVSVRTVTRYMA
QGFKQCLTLMLTQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-31 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TKWG_12310 YP_006379609.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 7e-32 48