Gene Information

Name : YSA_04975 (YSA_04975)
Accession : YP_006386576.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : transketolase domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2691496 - 2692344 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence : 
ATGACTGTCAACGCACCCGACACTTCGCTCTCGGCGCTCGCCGAACGCGCGTACAACATTCGCCGCCATGCCCTGCGCAT
GGGGCAGGTCCAGGGCCAGGGTTATGTCGGCCAGGCCCTCGGCGCCGCTGACTTGCTGGCCGTGTCGTACTTCCATGCGC
TGCGCTATCAGCCCCACAACCCCGAATGGGAGCAACGCGACCGCTTTTACCTGTCCATCGGTCACTACGCCATCGCCCTG
TATGCAGCGCTGATCGAAGCCGGCGTGATCCCCCTGGAGGAACTGGAAACCTATGGTTCGGACGACAGCCGCCTGCCGAT
GTCGGGCATGGCCGCTTACACGCCGGGCATGGAAATAACCGGGGGGTCGCTCGGCCACGGCTTGGGCATAGCGGTCGGCG
CCTGCCTGGGCCTGAAACGCAAGAACTCGGATTCGTTTGTCTACAACCTGCTCTCGGACGGCGAATTGAACGAGGGTTCA
ACCTGGGAAGCCGCGATGTCGGCCTCACATTGGAAACTGAACAACCTCATCGCAATCATCGACGTCAACAACCAGCAAGC
CGACGGCTACTCCAGCGAAGTGCTGGCCTTCGAGCCCATCGTTGACCGTTGGCAGGCGTTTGGCTGGTTTACCCAGCGCG
TGGACGGCAACGACATCGGCGCCCTGGTCGCCGCGTTCGACGCCGCACGCAACCATCAAGGGGCACAGCCGCGGGTCATC
ATCTGCGATACCAAGATGGGCAAGGGTGTGGACTTTCTCGAGTCACGTGAAAAAACCCACTTCATCCGCGTCGATGAAAA
CGAGTGGGATCTGGCATTGCAAAACCTTCAGGTCGGGAGAACTGTATGA

Protein sequence : 
MTVNAPDTSLSALAERAYNIRRHALRMGQVQGQGYVGQALGAADLLAVSYFHALRYQPHNPEWEQRDRFYLSIGHYAIAL
YAALIEAGVIPLEELETYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGACLGLKRKNSDSFVYNLLSDGELNEGS
TWEAAMSASHWKLNNLIAIIDVNNQQADGYSSEVLAFEPIVDRWQAFGWFTQRVDGNDIGALVAAFDAARNHQGAQPRVI
ICDTKMGKGVDFLESREKTHFIRVDENEWDLALQNLQVGRTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 1e-104 89
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 5e-104 88
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 3e-104 88
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 3e-104 88
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 6e-105 88