Gene Information

Name : YSA_05723 (YSA_05723)
Accession : YP_006386988.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3101675 - 3103852 bp
Length : 2178 bp
Strand : -
Note : -

DNA sequence :
ATGACTGGATACGTTCAAGTCGGTGGCCTTCAGGTCGCCAAGGTCCTGTACGACTTCGTGAACAACGAAGCCATCCCCGG
GACCGGCATCGTCGCCGAGCAGTTCTGGGCGGGTGCAGAGAAGATCATCAATGACCTCGCTCCAAAGAACAAAGCCCTGC
TCGCCAAGCGCGACGAGCTGCAAGCCAAGATCGACGCCTGGCACCAGGCACGCAAAGGCCAGGCCCACGACGCCGCAGCC
TACAAAGCATTCCTCCAGGAAATCGGCTACCTGCTGCCACAAGCCGACGATTTCCAGGCCACCACCCAGAACGTGGACGA
AGAAATCGCCCACATGGCCGGCCCACAACTGGTCGTTCCGGTGATGAACGCCCGCTTCGCCCTGAACGCCGCCAACGCCC
GCTGGGGTTCGCTGTACGACGCCCTTTACGGCACCGACGCCATCAGCGATGAAGGCGGCGCCGAAAAAGGCCAGTGTTAC
AACAAGGTACGCGGCGACAAGGTCATCGCCTTCGCCCGCGCCTTCCTTGACGAAGCCGCGCCACTGGCCGCCGGCTCGCA
CGTTGACTCCACGGGCTACCGCATCGAAGGCGGCAAGCTGGTTGTTGCCTTGAAAGGCGGCAGCAACAGCGGCCTGCGCG
ACGATGCGCAACTGATCGGCTTCCACGGCGACGCCGCCGCGCCGACTGCCGTGCTGCTCAAGCACAACGGCCTGCACTTC
GAAATCCAGGTCGATGCCAGCACCCCCGTCGGCAGCACCGACGCCGCTGGCGTCAAAGACATCCTGATGGAGTCGGCACT
GACCACCATCATGGACTGCGAAGACTCGGTTGCAGCCATAGACGCTGACGACAAAGTCATCGTCTACCGCAACTGGCTGG
GCTTGATGAAAGGCGACCTGGCCGAAAGCGTGAGCAAGGGTGGCAAAACCTTCACCCGCACCATGAACCCGGACCGCGAG
TACGCGGCGCCTAACGGCGGCAGCGTGACCCTGCACGGTCGTTCGTTGCTGTTCGTGCGCAACGTTGGCCACCTGATGAC
CAACCCGGCGATCCTCGATGCCCAAGGCAACGAAATCCCCGAAGGTATCCAGGACGGGCTGTTCACCAACCTGATCGCCC
TGCACAACCTCAACGGCAACACCAGCCGCAAGAATACCCGCAGCGGCAGCGTGTACATCGTCAAGCCGAAGATGCACGGC
CCTGAGGAAGTGGCCTTCGCCGCTGAGATCTTCAGCCAGGTCGAAGACCTGCTGGGCATGCCGCGCAACACCGTCAAGGT
CGGCATCATGGACGAGGAACGCCGTACCACGGTCAACCTCAAATCCTGCATCAAGGCAGCCGCCGAGCGCGTGGCGTTCA
TCAACACCGGCTTCCTTGACCGCACTGGCGATGAAATCCACACCTCGATGGAAGCCGGCGCCGTGGTGCGCAAAGGTGCC
ATGAAGAACGAGAAGTGGATCGGCGCCTACGAAAACAACAACGTCGACGTTGGCCTGGCCACCGGCCTGCAAGGCCGTGC
GCAGATCGGCAAAGGCATGTGGGCCATGCCTGACCTGATGGCCGCCATGCTCGAGCAGAAGATCGCCCACCCACTGGCCG
GTGCCAACACCGCCTGGGTACCGTCGCCAACTGCCGCCACCCTGCACGCCCTGCACTACCACAAAGTGGACGTACAGGCG
CGCCAGCGTGAACTGGCTTCACGCACCCCGGCGTCGGTGGACGACATTCTGGCCATTCCGCTGGCTGCCGACACCAACTG
GTCGGCCGAAGAGATCCGCAACGAGCTGGACAACAACGCCCAGGGCATTCTCGGCTACGTGGTGCGTTGGATCGACCAGG
GCGTGGGTTGCTCGAAGGTGCCGGACATCAACAACGTCGGCCTGATGGAAGACCGTGCCACCCTGCGCATCTCCGCCCAG
CTGCTGGCCAACTGGCTGCGCCACGGCGTGGTCAGCCAGGAGCAGGTGCTGGAAAGCCTCAAGCGCATGGCCGTGGTGGT
CGATCAGCAGAACGCTGGCGACGCCCTGTACCGCCCGATGGCGCCGAACTTCGACGACAACGTGGCGTTCCAGGCGGCTG
TGGAACTGGTGGTGGAAGGTGGCAAGCAACCGAACGGTTATACCGAACCGGTACTGCACCGCCGTCGCCGCGAGTTCAAG
GCGCGTAACGGGTTGTAA

Protein sequence :
MTGYVQVGGLQVAKVLYDFVNNEAIPGTGIVAEQFWAGAEKIINDLAPKNKALLAKRDELQAKIDAWHQARKGQAHDAAA
YKAFLQEIGYLLPQADDFQATTQNVDEEIAHMAGPQLVVPVMNARFALNAANARWGSLYDALYGTDAISDEGGAEKGQCY
NKVRGDKVIAFARAFLDEAAPLAAGSHVDSTGYRIEGGKLVVALKGGSNSGLRDDAQLIGFHGDAAAPTAVLLKHNGLHF
EIQVDASTPVGSTDAAGVKDILMESALTTIMDCEDSVAAIDADDKVIVYRNWLGLMKGDLAESVSKGGKTFTRTMNPDRE
YAAPNGGSVTLHGRSLLFVRNVGHLMTNPAILDAQGNEIPEGIQDGLFTNLIALHNLNGNTSRKNTRSGSVYIVKPKMHG
PEEVAFAAEIFSQVEDLLGMPRNTVKVGIMDEERRTTVNLKSCIKAAAERVAFINTGFLDRTGDEIHTSMEAGAVVRKGA
MKNEKWIGAYENNNVDVGLATGLQGRAQIGKGMWAMPDLMAAMLEQKIAHPLAGANTAWVPSPTAATLHALHYHKVDVQA
RQRELASRTPASVDDILAIPLAADTNWSAEEIRNELDNNAQGILGYVVRWIDQGVGCSKVPDINNVGLMEDRATLRISAQ
LLANWLRHGVVSQEQVLESLKRMAVVVDQQNAGDALYRPMAPNFDDNVAFQAAVELVVEGGKQPNGYTEPVLHRRRREFK
ARNGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 59