Gene Information

Name : YSA_06714 (YSA_06714)
Accession : YP_006387501.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3629483 - 3630010 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence : 
ATGCCCGTAGCCGACTCACCGAGCCCGTACCCGCTTGAACAGCTGTACAGCGAGCACCATGGCTGGCTTTTCAGCTGGCT
ACGTCGCAAGCTGCGTTGTTCGCACAGCGCAGCCGACCTGGCCCAGGACACCTTCGTGCGCATCCTGGCCTCGCGTGATG
CCTTGCTGGGCATGCGCGAGCCACGCGCCTACCTCAGTACCACCGCACGCCGCCTGTTGATCGACCGGGTGCGCCGACAG
CAAATCGAAGAGGCCTACCTCAGCGAACTTGCCTTGGCTGCCGAGGCGCTGGAAGGGCACCAGTCTCCCGAAAGCATCCT
CATCACCCTCGAAGCGCTGGAACAGATCGCTTTCCTGCTGGAAGGCCTGCACGTGAATGCCCGCGAGGCCTTCGTCGGTT
ACTACCTGGACGACCTGACCCAGCCTCAGATTGCCAAACGCCTACAGATTTCCCCACGCATGGTGCGCAAGTACCTGGCC
CAGGCCCTGATCCATTGCCACCGCACGCTGGACATTGCCGAACCGTGA

Protein sequence : 
MPVADSPSPYPLEQLYSEHHGWLFSWLRRKLRCSHSAADLAQDTFVRILASRDALLGMREPRAYLSTTARRLLIDRVRRQ
QIEEAYLSELALAAEALEGHQSPESILITLEALEQIAFLLEGLHVNAREAFVGYYLDDLTQPQIAKRLQISPRMVRKYLA
QALIHCHRTLDIAEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_06714 YP_006387501.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 2e-24 41