Gene Information

Name : YSA_06732 (YSA_06732)
Accession : YP_006387512.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3640285 - 3641178 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
GTGAAAGACGTCATCGCCCGCAAGTACCGCCTGGTGGTGAAGACCATCGGCTATATCGGTTGGTCGCTGTTCTGGCTGCT
GATCTGGGATGTGCTGGTCACCATCGATTTCATGCTGTTCTTGAACAGCAAGTTCACCCTGCCACTGATCCCGCTGACCC
TGCTGGGCTCAGCCTTGGTGGTGCTGGTGAGTTTTCGCAACAGCAGCGCCTACAACCGCTGGTGGGAGGCTCGCACCCTG
TGGGGCGCGCTGGTGAACAGTTCGCGCAGCTTCGCCCGGCAGACGCTGACGCTGATCGATGACCCGGATGACGGCCTGAA
CCCGGTCAAGGCCACCCTGCTGCGCCGGCATATCGCCTATGTGAACTGCCTGGCGGCTCACCTGAAAGGTGAGCCCTGCC
CGGAGGAGCTGATGGCCTTCATCCCGCCAGGTGAGTTCGAACGGCGCAACCGCTCGAACAATTTCGCCAATGACATTCTC
GGCGGCTCGGCAGCCTTGCTGGCGCGGGAATACCAGGCCGGGCGACTGGACAGCATTCGCCTGGCGCGGCTGGAGTCGAC
GCTGGTAGACCTGTCTAACGCCCAGGGCGGCATGGAGCGGATTGCCAATACGCCATTGCCCTACCCCTATGTGTATTTCC
CACGGCTGTTCATCACCCTGTTCTGCCTGATCGTGCCCGTGGGGTTGGTGGAGTCGCTAGGCTGGTTCACGCCGCTGGCG
TCGACGGTGGTAGGGTTCATGTTGCTGGCCATCGAGCGGATCGGCACGGACTTGCAGAGCCCGTTCAGGTTCAGCGAGCA
TCAGATCCAGATGGATACCATATGCGAGACGATCGAGCGTAACCTGGAGTCGATGCAGCGGGAGGCGCAGTGTGCCGAGG
CTGTAGACGCTTGA

Protein sequence :
MKDVIARKYRLVVKTIGYIGWSLFWLLIWDVLVTIDFMLFLNSKFTLPLIPLTLLGSALVVLVSFRNSSAYNRWWEARTL
WGALVNSSRSFARQTLTLIDDPDDGLNPVKATLLRRHIAYVNCLAAHLKGEPCPEELMAFIPPGEFERRNRSNNFANDIL
GGSAALLAREYQAGRLDSIRLARLESTLVDLSNAQGGMERIANTPLPYPYVYFPRLFITLFCLIVPVGLVESLGWFTPLA
STVVGFMLLAIERIGTDLQSPFRFSEHQIQMDTICETIERNLESMQREAQCAEAVDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PSPTO_1371 NP_791198.1 effector locus protein Not tested Hrp PAI Protein 5e-87 64
unnamed AAF71505.1 unknown Not tested Hrp PAI Protein 2e-87 64
unnamed AAT96051.1 Pspto1371-like protein Not tested T-PAI Protein 4e-79 63
unnamed AAT96095.1 Pspto1371-like protein Not tested T-PAI Protein 3e-79 63
unnamed AAT96112.1 Pspto1371-like protein Not tested T-PAI Protein 2e-79 63
unnamed AAT96170.1 Pspto1371-like protein Not tested T-PAI Protein 6e-80 62
unnamed AAT96224.1 Pspto1371-like protein Not tested T-PAI Protein 5e-80 62