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Name : YSA_06818 (YSA_06818) Accession : YP_006387559.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Virulence Product : TonB-dependent siderophore receptor Function : - COG functional category : - COG ID : - EC number : - Position : 3684879 - 3687308 bp Length : 2430 bp Strand : + Note : - DNA sequence : GTGAACAACAACAAACCTCTCCCACGCTTTCGCGCCCTGGCGCTGGCCCTGGCGGTCAGTACTGTGGCCCTTGGCAGCCA GGCCGCAGAGGCCGCTAATGCCCTCCACATCCAGGCCCAGCCGTTGGGTTCGGCGCTGAACCAGCTCGGCCAGCAAACCA GCCTACAGCTGTTTTTCAGCCCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTGGCGCCGGTGCAG GCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTACGAGATGTCCGGGGACACCGTTGTGGTGAAGCCTCTGCCGAC TACCCTTGACCTGGGCAGCGGCAGCCTGGAGCTGGCACCCACCGACATCAAGGTGGTCGGTGACTGGCTGGGTGATGCCC AGCAGAGCGTGGTACAGAACCACCCTGGGGCACGCACCGTGGTACGCCGCGAGGCAATGGTGGAGAAGGGCGCAATGAAC GTGCGCGACGTGCTGCGCGGCATCCCCGGCGTGCAAGTGCAGGACTCCAACGGGACCGGTGGCAGCGACCTGTCGCTGAA CGTGGGCGTACGCGGCCTTACTTCGCGCCTGTCGCCGCGCTCCACGGTACTGATCGATGGCATCCCGGCCGCCTTCGCGC CGTATGGCCAGCCACAGCTGTCGATGGCACCGATTTCTTCTGGCAACCTCGACAGCATCGACGTCGTGCGCGGTGCCGGC TCGGTGCGCTATGGCCCGCAGAACGTGGGCGGCGTGATCAACTTTGTAACCCGGGCGATTCCGGAAAAGGCCTCGGCAGA GCTGTCCACCACCCTGGAGACCTCCCAGCACGGTGGCTGGAAACATACCGAGTCAGCCTTCGTCGGTGGCACGGCCGACA ATGGCATGGGCGTGGCGCTGTTGTACACCGGGGTGAATGGCAACGGTTACCGTGAAAGCAACAACGGCAACGACATCGAC GACGTAATCCTCAAGACGCATTGGGCGCCAACCGATGTCGATGAGTTCTGGCTGAACTTCCATTATTACGATGGCCGTGC CGACATGCCGGGTGGCCTGACCCAGGCCCAATACGACAGCAACCCGTACCAGTCCCTGCGCGATTACGACTACTTCGCGG GCCGGCGCAAGGATGTGTCGTTCAAATGGCAGCGGCAGCTCGACGATGCCACCCAGTTCGAAGTGCTGACCTACTACACC GACAGCTTCCGCGGCAGCACCATCGCCTCGCGGGACATGAAGACGTTGTCGTCGTACCCGCGCAACTACCACACCTTTGC CATCGAACCCCGTGTGTCGCGCATCTTCTTTGCCGGCCCAACCACCCAGGAAGTCAGTGTCGGTTACCGTTACCTGAAGG AAGCGATGCGCGAACAATCGACTCGCCTGGCGCTGATCGACAACGTGCCGACGGTGACCCCGACTTCCGACGGCCACGTG TTCCAGGACCGCAGTGGCGGCACCGAGGCCAGCGCCTACTACATCGACGACAAGATCGACGTGGGCAACTGGACCATCAC CCCTGGCGTGCGCTTCGAGCACATCAATACCGACTGGCGCGACCGCCCGGTGCTGGACGCCAACAACCGCCCGGTAGCCG AGAAGAAGCGCAGCATCACCAGCAACGAGCCTTTGCCGGCACTGAGCGTGATGTACCACGTTTCCGATGCCTGGAAGGTG TTCGCCAACTACGAGACGTCGTTCGGTAGCCTGCAGTACTTCCAGCTGGGCCAGGGCGGTTCTGGCAACAGTACGGCCAA TGGCCTGGAGCCGGAAAAAGCCAAGACCTACGAAATCGGTACCCGTTATGACAATGGCGGCTTTGCCGGTGAGCTGACGG CGTTCTACATCGACTTCGATGATGAGCTGCAGTACATCAGCAACGACGTGGGCTGGACCAACCTTGGTGCGACCAAGCAC CAGGGCATCGAGGCTTCGGTGCGTTATGACCTGGCCGGGCTGGACCCGCGCCTGGACGGGCTGTCGGTGAGCGGTGGCTA CACCTATACCCGCGCGACCTATGAAGGGGATATCCCAGGGTTCAAGGGCCGAGACCTGCCGTTCTATTCACGCCAGGTGG CCACTGCCGGGGCGCGTTACGCAGTTAACCGCTGGACCTGGAACCTGGACGCCTATGCCCAATCGAAGCAGCGTGCGCCG GGAACCGGGATCAATGCCGATGGCAGTTTCAATGGCGACTACATCACCGAGCCGAGTGCTGACGGGCAGTATGGCGATAT TCCGGGTTATGTGACCTGGCATGCCCGCGGTGGGTACGAATTCGGGCCTGAACTGTCCAACCTGAAGCTGGCGGCGGGGG TGAAGAACCTGTTCGACAAGCAGTACTTCACCCGCTCCAGTGACAACAATGCCGGCCTTTACGTGGGTGAGCCGCGGACC TTCTACGTGCAGGCCAGTGTTGGGTTTTGA Protein sequence : MNNNKPLPRFRALALALAVSTVALGSQAAEAANALHIQAQPLGSALNQLGQQTSLQLFFSPELVAGKQAPAVSGNLAPVQ ALQQLLQGSGLTYEMSGDTVVVKPLPTTLDLGSGSLELAPTDIKVVGDWLGDAQQSVVQNHPGARTVVRREAMVEKGAMN VRDVLRGIPGVQVQDSNGTGGSDLSLNVGVRGLTSRLSPRSTVLIDGIPAAFAPYGQPQLSMAPISSGNLDSIDVVRGAG SVRYGPQNVGGVINFVTRAIPEKASAELSTTLETSQHGGWKHTESAFVGGTADNGMGVALLYTGVNGNGYRESNNGNDID DVILKTHWAPTDVDEFWLNFHYYDGRADMPGGLTQAQYDSNPYQSLRDYDYFAGRRKDVSFKWQRQLDDATQFEVLTYYT DSFRGSTIASRDMKTLSSYPRNYHTFAIEPRVSRIFFAGPTTQEVSVGYRYLKEAMREQSTRLALIDNVPTVTPTSDGHV FQDRSGGTEASAYYIDDKIDVGNWTITPGVRFEHINTDWRDRPVLDANNRPVAEKKRSITSNEPLPALSVMYHVSDAWKV FANYETSFGSLQYFQLGQGGSGNSTANGLEPEKAKTYEIGTRYDNGGFAGELTAFYIDFDDELQYISNDVGWTNLGATKH QGIEASVRYDLAGLDPRLDGLSVSGGYTYTRATYEGDIPGFKGRDLPFYSRQVATAGARYAVNRWTWNLDAYAQSKQRAP GTGINADGSFNGDYITEPSADGQYGDIPGYVTWHARGGYEFGPELSNLKLAAGVKNLFDKQYFTRSSDNNAGLYVGEPRT FYVQASVGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecA | AAL08456.2 | FecA | Not tested | SRL | Protein | 8e-137 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YSA_06818 | YP_006387559.1 | TonB-dependent siderophore receptor | VFG1047 | Protein | 5e-137 | 44 |
