Gene Information

Name : YSA_08176 (YSA_08176)
Accession : YP_006388306.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4411173 - 4411940 bp
Length : 768 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATAAGCTGGACGTGGTTCCACAAGCTGGGCTCCCCGAAATGGTTCTATGCCATCAGCGGCCGCATGCTGCCGTG
GCTGGCCGGTGCTGCCGTGCTCCTGCTGCTGGTCGGCATCACCTGGGGCCTGGCCTTCGCCCCCCAGGACTACCAGCAAG
GCAACAGCTTCCGCATCATCTATATCCACGTGCCGGCGGCGATGCTGGCGCAGTCCTGCTATGTGCTACTGGCGGTGGCC
GGGGTGGTGGGGCTGGTGTGGAAGATGAAACTGGCCGACGTTGCCCTGCAATGTGCCGCGCCCATTGGCGCCTGGATGAC
CGCCGTGGCGCTGGTTACCGGCGCCATCTGGGGCAAACCGACCTGGGGCAGCTGGTGGGTGTGGGATGCCCGCCTTACGT
CCATGCTCATCCTGCTGTTCCTGTACTTCGGCATTATTGCGCTGGGCCAGGCGATCAGTAATCGTGACAGTGCAGCCAAG
GCCTGTGCGGTGCTTGCGATTGTCGGTGTGGTGAATATCCCGATCATCAAGTATTCAGTGGAGTGGTGGAACACCCTGCA
CCAGGGCGCCACCTTCACCCTTACCGAAAAGCCGGCGATGCCGGCCGAAATGTGGCTGCCGCTGTTGTGCACGGCGCTGG
GTTTCTACTGTTTCTTCGGCGCCGTACTGCTGCTGCGCATGCGCCTTGAAGTGCTCAAGCGCGAAGCACGCGCCAGTTGG
GTCAGGGACGAAGTATTGAACAGCCTGGGGCGGAGGGCCACACAATGA

Protein sequence : 
MKISWTWFHKLGSPKWFYAISGRMLPWLAGAAVLLLLVGITWGLAFAPQDYQQGNSFRIIYIHVPAAMLAQSCYVLLAVA
GVVGLVWKMKLADVALQCAAPIGAWMTAVALVTGAIWGKPTWGSWWVWDARLTSMLILLFLYFGIIALGQAISNRDSAAK
ACAVLAIVGVVNIPIIKYSVEWWNTLHQGATFTLTEKPAMPAEMWLPLLCTALGFYCFFGAVLLLRMRLEVLKREARASW
VRDEVLNSLGRRATQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-38 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_08176 YP_006388306.1 heme exporter protein CcmC VFG1856 Protein 3e-43 50