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Name : YSA_08181 (YSA_08181) Accession : YP_006388309.1 Strain : Pseudomonas putida ND6 Genome accession: NC_017986 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 4412604 - 4414550 bp Length : 1947 bp Strand : + Note : - DNA sequence : ATGATTCTGGCCATCTGCTTTGCCGTCGTACAGGCCAGTGTGCCGTTGCTTGGCGCGTGGCGTGGCGACAGCCTGTGGAT GAGCCTGGCGCGGCCGGCAGCGTGGGGGCAGTTCGCCTTCCTGGCGTTTGCCTTTGCCTGCCTGACCCATGCCTTCATGA CAGACAATTTCTCGGTCGCCTATGTGGCCAGCAACTCCAACAGCGCCTTGCCCTGGTACTACAAGTTCAGTGCGGTGTGG GGCGCCCATGAGGGTTCGTTGCTGCTTTGGGCGCTGATCCTCGGCGGCTGGACCTTTGCCGTGTCGGTGTTCTCCCGGCA GTTGCCGCAGGTGATGCTGGCCCGCGTGCTGGCGGTAATGGGCATGATCAGCGTGGGCTTCCTGAGCTTCCTGATCATTA CTTCCAACCCGTTCCAGCGCCTGCTGCCGCAGGTGCCGACCGATGGCCGTGACCTTAACCCGCTGCTGCAGGACTTTGGC CTGATCGTTCACCCACCCATGCTCTACATGGGCTATGTGGGCTTCTCGGTGGCCTTCGCGTTCGCCATTGCCGCCTTGCT CGGCGGCCGGCTGGACGCTGCCTGGGCGCGCTGGTCGCGGCCGTGGACCATCGTCGCCTGGGCTTTCCTGGGTGTTGGCA TCACCTTGGGGTCGTGGTGGGCCTACTACGAACTGGGCTGGGGTGGCTGGTGGTTCTGGGACCCGGTGGAGAACGCCTCG TTCATGCCTTGGCTGGTGGGCACCGCACTGATCCACTCGCTGGCGGTGACCGAGAAACGCGGGGTATTCAAGAGCTGGAC GGTGCTGCTGGCAATTGCCGCATTCTCGCTGAGCCTGCTGGGTACCTTCCTGGTGCGTTCCGGGGTGCTGACCTCGGTGC ACGCGTTTGCCGCCGACCCGTCGCGGGGTATTTTCATCCTGTTTTTCCTGCTGTTCGTGGTCGGCGGGTCGCTCACCCTG TTCGCCCTGCGCGCACCGGTGGTCAAGAGCCAGGTCGGTTTCGCCCTGTGGTCGCGTGAAACGCTGCTGCTGGCCAACAA CCTGGTGCTGGTGGTCGCAGCTTCGATGATTCTGCTCGGTACCCTGTACCCATTGGTGCTCGATGCCCTGACCGGGGCCA AGCTGTCGGTCGGCCCGCCCTATTTCGACGCCTTGTTCCTGCCGCTGATGGCGCTGCTGATGGTGGTGCTGAGCGTGGGC GTGGTGGTGCGCTGGAAGGACACCCCGGGCAAATGGTTGGTCAGCATGATGACCCCGGTATTGATCGGCAGTGCCATCCT TGCCCCGGTTGCCGGCTTTATCGTCGACGACTTCGACTGGCCGACGCTGACGGCCTTCGCCCTGGCCGCCTGGGTAGTGC TTGGCGGGCTGCGTGACATTTTCGACAAGACCCGCCACAAGGGCCTGGTCAAAGGCCTGCCGGGCCTGGGCCGCAGCTAC TGGGGCATGCAACTGGCGCACCTGGGCCTGGCGGTGTGTGCGCTGGGCGTGGTGCTGTCCAGCAACAACAGCGCCGAGCG CGACCTGCGCATGGCGCCGGGCGAAAGCGTGGAGCTGGGTGGCTATCACTTCCTGTTCCAGGGCGCCAAGCACTTCGAGG GGCCGAACTTCATCTCTGACAAGGGCACCATCGTGATCAGCCGCGATGGCCGTGAAGTGACCACACTGTACCCGGAGAAG CGCCTGTACACCGTGCAACAGTCGATGATGACCGAAGCGGGCATCGACGCCGGCTTTACCCGCGACCTGTACGTCGCGCT TGGCGAGCCACTGGAGAATGGCGCTTGGGCTGTGCGCATACATATTAAGCCTTACGTCCGCTGGATCTGGCTGGGCGGTC TGCTGACCGGCCTGGGCGGGTTGCTGGCGGCCCTCGACCGGCGCTACCGCGTCAAGGTCAAGACCCGGGTGCGTGATGTC CTGGGCGTGTCTGGAGCAGCTGCATGA Protein sequence : MILAICFAVVQASVPLLGAWRGDSLWMSLARPAAWGQFAFLAFAFACLTHAFMTDNFSVAYVASNSNSALPWYYKFSAVW GAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISVGFLSFLIITSNPFQRLLPQVPTDGRDLNPLLQDFG LIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGVGITLGSWWAYYELGWGGWWFWDPVENAS FMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFAADPSRGIFILFFLLFVVGGSLTL FALRAPVVKSQVGFALWSRETLLLANNLVLVVAASMILLGTLYPLVLDALTGAKLSVGPPYFDALFLPLMALLMVVLSVG VVVRWKDTPGKWLVSMMTPVLIGSAILAPVAGFIVDDFDWPTLTAFALAAWVVLGGLRDIFDKTRHKGLVKGLPGLGRSY WGMQLAHLGLAVCALGVVLSSNNSAERDLRMAPGESVELGGYHFLFQGAKHFEGPNFISDKGTIVISRDGREVTTLYPEK RLYTVQQSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRIHIKPYVRWIWLGGLLTGLGGLLAALDRRYRVKVKTRVRDV LGVSGAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-107 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 7e-103 | 56 |
