Gene Information

Name : YSA_01633 (YSA_01633)
Accession : YP_006384776.1
Strain : Pseudomonas putida ND6
Genome accession: NC_017986
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 857374 - 857874 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAACGCTCGATCCCCAGGCCCTGCACCAGCTGTACAGCGAAAACAACAGCTGGCTGAAGGGCTGGCTGCGCGCCCG
CCTGGGCAACGCCGCCGACGCTTCCGACCTGGCGCACGACACGTTCTTGCGGGTAATGACCGCGCGTAACCCGTTGCCGA
TCCGTGAGCCGCGCAGCTACCTCAGCGCTATCGCCCGCGCCCTTCTGATAGACAAAGCTCGCCGTCGCATCATCGAAAAA
GCTTACCTGCAGGCGCTGGCCCTGCGTCCGGAACCGGTAGAGGTGTCGCCGGAGGTGCGCTTGTCCATCATAGAGATGCT
GGTGGCCGTGGACAGCCTGCTCGACGAACTCGGCGCCAAGACCCGCGCCATCTTCCTTGCCGTTCAACTCGAAGGCCTGA
CCTACGGCGCTGCGGCCGAGCGCTTCGGCGTGTCGATCACCACCGTGAAGAATCACCTGATCAAGGCCATGACTCGCTGC
CTGCTGGCAGTCGAAGGCTGA

Protein sequence : 
MATLDPQALHQLYSENNSWLKGWLRARLGNAADASDLAHDTFLRVMTARNPLPIREPRSYLSAIARALLIDKARRRIIEK
AYLQALALRPEPVEVSPEVRLSIIEMLVAVDSLLDELGAKTRAIFLAVQLEGLTYGAAAERFGVSITTVKNHLIKAMTRC
LLAVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 9e-35 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YSA_01633 YP_006384776.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 4e-35 50