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Name : glcD3 (USDA257_c17760) Accession : YP_006397121.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 1874853 - 1876310 bp Length : 1458 bp Strand : - Note : - DNA sequence : ATGTCAACCATAGCCATGCCCGAACCGGATGCCGGCGTCCTTGCGAGAGCGCCGCAAATCGTAGCAGCGCTGGAGGCTGC CCTACCGGCAAGTATTGTCATCTCAAACGCGGAGGAAACACGGGCCTACGAATGCGACGCGCTAACCGCGTACCGCTGTC CGCCTCTTGCTGTTGTACTACCGCGCACAACCGAGGAAGTGGCGACTGCCATGCGCGTCTGCCATCAGTTGCGCGTACCC GTCGTTCCCCGTGGGGCAGGCACTTCACTTGCCGGCGGCGCTTTGCCGACCGCCGACAGCGTCGTCATCGGCACAATGCG CCTGCGCGAGATCCTCGAGGTCGACACCGCCAACCGCTTCATTCGTGTGCAGACGGGCGTCACGAACCTCGCCGTGAGCG CCGAACTGGAAGCTGACGGCTTCTTCTACGCGCCGGATCCCTCGTCGCAGCTTGCTTGCACGATCGCTGGTAACATCGCG ATGAATTCCGGCGGCGCCCACTGCCTAAAATACGGCGTTACGACGAACAATCTGATGGGTGTCCGGATCGTCATGTCAAC GGGCGAGATCATTGAGCTTGGCGGCCCACTCCTGGGTACATCAGGACTCGACCTCCTCGGTTTGATCTGCGGGTCGGAGG GCCAGCTCGCCATTGTGACCGAAGCAACGCTCCGGATTGTGCCAAAGCCCGAAGGCGCACGGCCCGTGCTGATCGGCTTC GACAGCGCCGAAACGGCTGGTGAGTGCGTGGGACGGATTATCCGATCGGGTCTGCTGCCCGTGGCGATCGAATATATGGA CGACGTTTGCCTACGCGCGGTCGAGGCCTTCGTCAAAGCCGGCTATCCAAATTGCACCGCCTTGCTGATTGTCGAGGTCG AGGGATCCGAGGCCGAAATCGACCATCAAATCGAACGCATCCGTTTGATCGCCGAGGAGTTGAACCCGGTGGAGTTCCGT GCCAGCCGAACTGCCGAGGAAAGCCTGGCGATCTGGAAGGGGCGCAAATCGGCATTTGGGGCGATGGGCCGGCTCGGTGA TTACCTGTGTCTCGACGGAACCGTACCCGTCTCGAAACTCCCCCACACACTTAAGCGTATTGGCGAGCTGTCTAAAGCTT ATGGCTTGGAGGTCGCCAATGTATTCCACGCAGGCGATGGCAACATGCACCCGTTGATCTTGTTCAACGCGAACGCACCC GGTGAGCTCGAGCGAGCCGAAGAATTCGGTGCCGACATTCTTCGGCTTTGCGTGGACGTAGGAGGCTGCCTGACCGGCGA GCATGGGGTCGGAATCGAGAAGCGCGATCTCATGACGAAACAATATACGGCCGATGACCTGGCCATTCAGATGGAAATCA AGAGCGTCTTCGATCCCGCCTGGCTGCTCAATCCAGCCAAGGTCTTCCCACTCGAAGTCAGTCAGCCGCATCGTGACGCA GCGTCGAGATGCCCATGA Protein sequence : MSTIAMPEPDAGVLARAPQIVAALEAALPASIVISNAEETRAYECDALTAYRCPPLAVVLPRTTEEVATAMRVCHQLRVP VVPRGAGTSLAGGALPTADSVVIGTMRLREILEVDTANRFIRVQTGVTNLAVSAELEADGFFYAPDPSSQLACTIAGNIA MNSGGAHCLKYGVTTNNLMGVRIVMSTGEIIELGGPLLGTSGLDLLGLICGSEGQLAIVTEATLRIVPKPEGARPVLIGF DSAETAGECVGRIIRSGLLPVAIEYMDDVCLRAVEAFVKAGYPNCTALLIVEVEGSEAEIDHQIERIRLIAEELNPVEFR ASRTAEESLAIWKGRKSAFGAMGRLGDYLCLDGTVPVSKLPHTLKRIGELSKAYGLEVANVFHAGDGNMHPLILFNANAP GELERAEEFGADILRLCVDVGGCLTGEHGVGIEKRDLMTKQYTADDLAIQMEIKSVFDPAWLLNPAKVFPLEVSQPHRDA ASRCP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-99 | 49 |
