Gene Information

Name : USDA257_c39610 (USDA257_c39610)
Accession : YP_006399262.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4127468 - 4128187 bp
Length : 720 bp
Strand : -
Note : -

DNA sequence : 
GTGGGGAACGAGGCATCGGCCGTTGCCCTTGAGGCACGCGAACTCACCAAGATCTATCGGATGGGTACGGTAGAAGTTCA
CGCCCTGCGCGGCGTGAACGTGGACCTTCGCGAGGGCGAACTGGTGGTTCTGCTGGGGCCATCCGGAAGTGGCAAATCGA
CCTTGCTCAATATCCTCGGCGGGCTGGACAGGCCTACAAGCGGCAGCGTTATGTTTCGCGGCCACGAGCTCACAATGGAC
AGTGAACGCGCGCTCAACCTCTACCGCCGCAACCACGTCGGCTTCGTCTTTCAGTTCTACAATCTCATACCTAGCCTGAC
CGCGCGCGAAAACGTCTCCCTCGTAACCGAGATTGCGAAGAACCCGATGCCGCCCACAGACGCGCTGACAATGGTCGGCC
TCGGCGACAGGCTCGATCATTTTCCCGCGCAGATTTCCGGCGGCGAGCAGCAACGCGTCGCTATTGCCCGCGCGATCGCG
AAGCGACCCAACCTGCTTCTTTGCGACGAGCCGACCGGCGCGCTCGACAGCAAGACTGGTATCCTCGTGCTCGACGCGAT
TTTGAAGATCAATCGGGAACTCGGCACAACGACGGCGCTGATTACCCACAACGCAGTGATTGCCGAGATCGCCAATCGCG
TGCTTTACTTTGCCGACGGGCGTATCGTCGAAACGCGGCAAAATGCCGTTCAGCGCGCCCCCGGCGAACTCGCCTGGTGA

Protein sequence : 
MGNEASAVALEARELTKIYRMGTVEVHALRGVNVDLREGELVVLLGPSGSGKSTLLNILGGLDRPTSGSVMFRGHELTMD
SERALNLYRRNHVGFVFQFYNLIPSLTARENVSLVTEIAKNPMPPTDALTMVGLGDRLDHFPAQISGGEQQRVAIARAIA
KRPNLLLCDEPTGALDSKTGILVLDAILKINRELGTTTALITHNAVIAEIANRVLYFADGRIVETRQNAVQRAPGELAW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
USDA257_c39610 YP_006399262.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 6e-49 52
USDA257_c39610 YP_006399262.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-29 44
USDA257_c39610 YP_006399262.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-38 42
USDA257_c39610 YP_006399262.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-34 42