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Name : glcD1 (USDA257_c04900) Accession : YP_006395843.1 Strain : Sinorhizobium fredii USDA 257 Genome accession: NC_018000 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 534758 - 536197 bp Length : 1440 bp Strand : + Note : - DNA sequence : ATGACGGAGACGATCGGATTCCTGAAACCCAGGCAGGCCGTCCTCGACCGCCGCGGGGAGATCATCGCCGACCTCGCCGA CCTCTTGCCGGAAGGCTGCCTGATCAGCGACGAGCGGGGGCTGAAGCCCTTCGAGACGGACGCTTTTCTCGCCTATCGCC GCCTGCCGCTCGCCGTCGTCCTGCCGGAGACGACCGAGCACGTCTCCGCCATCCTCAAATATTGCAGCCGCTACGGGATC CCGGTCGTGCCGCGCGGCGCCGGCACCTCGCTCTCCGGAGGCGCCATCCCGCAGGAGGACGCGATCGTCGTCGGCCTCTC GAAGATGTCGCGCATTCTCGATGTCGACCTCTTCAACCGCACGGCCACGGTTCAGGCGGGCGTCACCAATCTCAACATTT CCGAGGCGGTGAGTGCCGACGGCTTCTTCTATGCGCCCGATCCGAGCTCGCAGCTTGCCTGCACGATCGGCGGCAACATC GGCATGAATTCCGGCGGCGCCCATTGCCTGAAATACGGAGTCACGACCAACAACCTGCTGGGCGCCAAGATGGTGCTCTT CGACGGCACGGTGATCGAGCTCGGCGGCAGGGCGCTCGATGCACCCGGCTACGATCTGCTTGGTCTCGTCTGCGGCTCGG AGGGCCAGCTCGGCATCGTCACGGAGGCGACGGTCCGGCTGATCGCCAAGCCGGAAGGCGCGCGCCCCGTCTTGTTCGGC TTCGCCTCGTCGGAGGCGGCCGGTTCCTGTGTGGCCGATATAATCGGGTCGGGCATCATCCCGGTGGCGATCGAATTCAT GGACAGGCCGGCGATCGAGATCTGCGAGGCCTTTGCCCATGCCGGCTACCCGCTCGATGTCGAGGCCCTGCTGATCGTCG AGGTCGAGGGCTCCGAGGCGGAGATGGACGCGATGCTTCAGAGCATTATCGAGATCGCCCGGCGTCACAGCGTCATGACG ATCAAGGAATCGCAATCGGCGCTCGAGGCGGCGCTGATCTGGAAGGGCCGGAAATCCGCCTTCGGCGCCACCGGCCGGGT CGCGGACTATATCTGCATGGACGGCACGGTTCCGCTGAGCCAACTTTCTCACGTATTGCGCAGGACCGGCGAGATCGTCG CGAGCTACGGGCTCCGCGTCGCCAATGTGTTCCATGCCGGCGACGGTAACATGCATCCGCTGATCCTCTATAACATCAAC GATCCGGCGGATGCGGCGCGCGCCGAGGCGGCCGGCAATGACATCCTGAAGCTCTGCGTCGAGGCGGGCGGCTGTCTGAC GGGCGAGCACGGGGTCGGCATCGAGAAGCGGGACCTGATGCGGTATCAGTACAACAAGGCCGATCTCGACCAGCAGATGG CGGTGCGTGCGGCCTTCGATCCGCAATGGCTTCTGAATCCGTCGAAAGTATTTCCGCTCGAAGGACGGCCTGCCGCATGA Protein sequence : MTETIGFLKPRQAVLDRRGEIIADLADLLPEGCLISDERGLKPFETDAFLAYRRLPLAVVLPETTEHVSAILKYCSRYGI PVVPRGAGTSLSGGAIPQEDAIVVGLSKMSRILDVDLFNRTATVQAGVTNLNISEAVSADGFFYAPDPSSQLACTIGGNI GMNSGGAHCLKYGVTTNNLLGAKMVLFDGTVIELGGRALDAPGYDLLGLVCGSEGQLGIVTEATVRLIAKPEGARPVLFG FASSEAAGSCVADIIGSGIIPVAIEFMDRPAIEICEAFAHAGYPLDVEALLIVEVEGSEAEMDAMLQSIIEIARRHSVMT IKESQSALEAALIWKGRKSAFGATGRVADYICMDGTVPLSQLSHVLRRTGEIVASYGLRVANVFHAGDGNMHPLILYNIN DPADAARAEAAGNDILKLCVEAGGCLTGEHGVGIEKRDLMRYQYNKADLDQQMAVRAAFDPQWLLNPSKVFPLEGRPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-97 | 49 |
