Gene Information

Name : glcB (USDA257_c59250)
Accession : YP_006401192.1
Strain : Sinorhizobium fredii USDA 257
Genome accession: NC_018000
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 6173587 - 6175758 bp
Length : 2172 bp
Strand : +
Note : -

DNA sequence :
ATGGACCGCGTTGAGAACAATGATCTGAAGATCGATGCGGGCCTTCACCGCTTCCTGGTCGACGAGGCGATGCCGGGCAC
CGGCGTCGATCCCGACCATTTCTTTTCCGCCCTCGCGGAACTCGTCCATGATCTCGCGCCGAAGAACCGAACGCTTCTCG
CCAAGCGCGACGAACTCCAGGCAAAGCTCGATGCCTGGTACCGCGAACATGGTGCTCCGGTCGACCTCGATGCCTATCAG
GCTTTCCTGAGAGAGATCGGCTATCTCCTGCCGGAGGGGCCGGATTTCTCGGTGTCGACCGCCAATGTCGATGCCGAAAT
CGCCACCATTGCGGGGCCGCAACTCGTCGTTCCGGTGATGAATGCCCGCTATGCGCTGAACGCCGCCAATGCGCGCTGGG
GTTCGCTCTATGACGCGCTCTACGGGACCGACGCTATTCCCGATGCGGACGGGGCCGAGCGCGGCAGAAGCTATAATCCG
GCGCGCGGTGCCAAGGTCATTGCCTGGGCACGGGATTTTCTCGACGCGAGCGTTCCGCTTGCCACGGGCCGCTGGAGCGA
GGTCGCTGCGCTTGCGATCGACGGGCCTGCTCTTTCGCTGAGCTTGACGAACGGCGCCACGATGTCGCTTCGGAATCCGG
CTCAGTTCGCCGGCTATTCCGGGTCCGCGGCGACGCCTTCCGAGATCGTCCTCACCCAGAACAATCTTCACATCGTCATC
GTCCTCGATGCAACGACGCCGATCGGCAAGGCTGACCAGGCCGGCATTTCCGACGTCATCCTCGAATCGGCGATCACGAC
GATCATGGACTGCGAGGACTCCATTGCCGCGGTCGATGCCGAGGACAAGGTCGTTGTCTATCGAAACTGGCTCGGGCTGA
TGAAAGGCGACCTCGAGGAAGAGGTCGCCAAGGGCGGCAGGACGTTCACGCGCAAGCTCAATGCTGACCGCGTTTTCACC
AGGTCCGATGGTTCGGCGCTGACGTTGCCCGGTCGTTCGCTGATGCTGGTGCGCAATGTCGGGCATTTGATGACCAATCC
GGCGATCCTCGACCGTGACGGCCGCGAGGTGCCCGAAGGCATCATGGACGCCATGGTGACGGCGCTGATCGCTCTGCACG
ATATCGGCCCGAGCGGAAGGCGGGCAAACTCGCGCAGCGGCTCGATGTATGTAGTCAAGCCGAAGATGCACGGCCCGGAG
GAAGTGGCCTTCGCCTGCGAGATTTTCGCTCGCGTCGAGGCGGCGCTCGGGCTTCCGGCCAATGCCATCAAGATGGGCAT
CATGGACGAGGAACGGCGCACCACCGTCAATCTCAAGGAATGCATCCGCGCCGCCCGCGAGCGGGTCGTCTTCATCAATA
CCGGCTTCCTCGACCGTACCGGCGACGAGATCCATACCTCGATGGAAGCCGGCCCGATGATCCGCAAGGGCGACATGAAG
CAGGCGGCCTGGATCGGTGCCTACGAAAATTGGAATGTCGATATCGGCCTCGAGTGCGGCCTTTCCGGCCACGCCCAGAT
CGGCAAGGGCATGTGGGCGATGCCGGACCTGATGGCCGCCATGCTGGAGCAGAAGATCGCCCATCCGAAGGCCGGCGCCA
ATACTGCCTGGGTTCCCTCGCCAACGGCGGCGACGTTGCACGCCACGCATTATCACCGGATCAACGTTGCCGAGGTACAG
GCGGACTTCAAGAGCCGGCCGCGTGCCAAGCTCGCCGATATTCTCTCGGTACCGGTGGCGGCGCGGCCGAACTGGACAGA
AGAGGAGATCCAGCGCGAACTCGACAACAACGCCCAGGGCATTCTCGGCTATGTCGTGCGCTGGGTCGACCAGGGCGTCG
GCTGCTCGAAGGTGCTCGACATCAACAATGTCGGTCTGATGGAAGACCGCGCGACGCTGCGCATCTCGGCGCAGCACATG
GCCAACTGGCTGCACCATGGCATCGTCAGCGAGGCGCAGATCGTCGAGACGATGAAGCGGATGGCGGCCGTCGTCGACCA
GCAGAATGCAGGCGATCCGCACTATGCGCCCATGGCCGGCCATTTCGACGAATCGATCGCCTTCCGGGCAGCGCTCGAAC
TGGTGCTCAATGGCCGCGAGCAGCCGAACGGCTATACCGAACCAGTGCTGCACCGCCGCCGCCTGGAGCTCAAGGCGAAA
CTGACCGCTTGA

Protein sequence :
MDRVENNDLKIDAGLHRFLVDEAMPGTGVDPDHFFSALAELVHDLAPKNRTLLAKRDELQAKLDAWYREHGAPVDLDAYQ
AFLREIGYLLPEGPDFSVSTANVDAEIATIAGPQLVVPVMNARYALNAANARWGSLYDALYGTDAIPDADGAERGRSYNP
ARGAKVIAWARDFLDASVPLATGRWSEVAALAIDGPALSLSLTNGATMSLRNPAQFAGYSGSAATPSEIVLTQNNLHIVI
VLDATTPIGKADQAGISDVILESAITTIMDCEDSIAAVDAEDKVVVYRNWLGLMKGDLEEEVAKGGRTFTRKLNADRVFT
RSDGSALTLPGRSLMLVRNVGHLMTNPAILDRDGREVPEGIMDAMVTALIALHDIGPSGRRANSRSGSMYVVKPKMHGPE
EVAFACEIFARVEAALGLPANAIKMGIMDEERRTTVNLKECIRAARERVVFINTGFLDRTGDEIHTSMEAGPMIRKGDMK
QAAWIGAYENWNVDIGLECGLSGHAQIGKGMWAMPDLMAAMLEQKIAHPKAGANTAWVPSPTAATLHATHYHRINVAEVQ
ADFKSRPRAKLADILSVPVAARPNWTEEEIQRELDNNAQGILGYVVRWVDQGVGCSKVLDINNVGLMEDRATLRISAQHM
ANWLHHGIVSEAQIVETMKRMAAVVDQQNAGDPHYAPMAGHFDESIAFRAALELVLNGREQPNGYTEPVLHRRRLELKAK
LTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 60