Gene Information

Name : Thivi_1723 (Thivi_1723)
Accession : YP_006413822.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Unknown
Product : cold shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1873832 - 1874035 bp
Length : 204 bp
Strand : +
Note : PFAM: 'Cold-shock' DNA-binding domain

DNA sequence :
ATGGCTACAGGCACCGTTAAGTGGTTCAGTGACGAAAAAGGCTTTGGATTCATCGCTCCTTCCGATGGTTCAAAGGACGT
CTTCGTCCATCACAGCGCCGTCCAGGGCAGTGGCTTCAAGTCGCTGGCCGAGGGGCAAAGCGTGTCCTACGACGTCGAGC
AAGGTCAGAAAGGCCCGAGCGCGACCAACGTCGTCCCCCAGTAA

Protein sequence :
MATGTVKWFSDEKGFGFIAPSDGSKDVFVHHSAVQGSGFKSLAEGQSVSYDVEQGQKGPSATNVVPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-18 67
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 6e-04 42