Gene Information

Name : Thivi_2151 (Thivi_2151)
Accession : YP_006414226.1
Strain : Thiocystis violascens DSM 198
Genome accession: NC_018012
Putative virulence/resistance : Unknown
Product : malate synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 2353635 - 2355827 bp
Length : 2193 bp
Strand : +
Note : PFAM: Malate synthase; TIGRFAM: malate synthase G

DNA sequence :
ATGATCGAACGACTGGAGACCGGCGGCCTCAAGGTCGCCAAACCCTTGTATGACCTGGTCAGCAACGAGATCGCTCCAGG
AACCGGGATTGCCCCGGACGATTTCTGGAGAGATTTCGGCGCAATCCTGAGCGAGCTTGCGCCGCGCAATCGCGAGCTGC
TCGCCCGGCGGGACGCGCTACAGACGCAGCTCGACGCCTGGCATCGCGAGCGCCGCGGCCAGCAATTGGATCTGGACGCC
TATCGCGCCTATCTGTCCGAGATTGGCTATCTGGTTCCCGAGGGACCGGATTTCCTGGTCAGCACCACCAATGTCGACCC
GGAAATCGCCGCGATTGCCGGCCCCCAGCTCGTGGTGCCGCTGAGCAATGCGCGCTATGCCCTGAACGCGGCCAATGCGC
GCTGGGGCAGTCTCTACGACGCGCTCTATGGAACCGATGCGATTCCGGAGGAGGATCATCTCAAGCGCGGTCACGACTTC
AACCCCGAGCGCGGGGCGGCGGTGGTCGCGCGCGCCGCGGCCTTTCTGGACGCGACCGTCCCGCTCAATCGCGGCTCCTA
CGGCGATGCGTGCGGATTCAAGCTCGAACAGGGCAAGCTGGTCGTCTGTCTCCCCGATAACAGTCAGACCATGCTGACGG
ATCCGGCGCAATTCATCGGCTACCGCGGCAGTCCGGAACAGGTTTCGGCCATTCTGCTCGTCCATCATGGACTGCATATC
GAGATCCAGATCGACCGCGAGCACGCCATCGGCAGGGAGAGCCCGTCCGGGATCGCGGACATCCTGCTGGAGTCCGCCGT
GACCTGCATTCAGGACTGCGAGGACTCGGTCGCCGCCGTCGATACCGAGGACAAAGTCGGCGTGTATCGCCACTGGCTCG
GCTTGATGAAAGGCGATCTGACCGTGCAGTTCAGCAAGGGCGGCCGGATGGTCGAACGCGCGATGGAACCTGATCGCAAC
TATATCCGGCTCGGCGGCGGCACCTTGGCCATGCCCAGCCGCGCGCTCATGCTGGTGCGCACGGTCGGCCATCTGATGAC
CACCGACGCCGTGCTCGACGCCGCGGGCCAGGAGGTGCCGGAAGGTATGCTCGACGCCATGATCACGGTCCTGTGCGCGC
TGCACGACGTGCACCCCGATGTCGGCGCGCGGCGCAACTCGCGCGCCGGCAGCGTCTACCTCGTCAAGCCCAAGCTGCAC
GGACCCGAGGAGGTCCAGCTTGCCGTCGACCTCTTCGCGCGCGTCGAGGCGGCCTTGGGTCTTCCCGTCAACACGGTCAA
GATCGGTATCATGGACGAGGAGCGTCGCACCACGGTAAACCTCAAAGAATGCATCCGGGTCGCCCGCGAGCGGATCATCT
TCATCAATACCGGTTTTCTCGACCGCACCGGCGACGAGATTCATAGCGGCATGGAAGCCGGTCCGGTGCCGCGCAAGGGC
GACATGAAGCGCCAGCCCTGGCTCCTGGCCTACGAGGACTGGAATGTGGATGTGGGTCTGGCCTGCGGCCTGCCCGGACA
CGCTCAGATCGGCAAGGGCATGTGGACCATGCCGGACGAGATGCGCGCCATGCTCGCGAGCAAGATCGCGCATCCTCAGG
CCGGCGCCAACTGCGCCTGGGTGCCCTCGCCAACCGCCGCGACCCTGCATGCCATCCACTATCATCAGGTCGACGTGGCC
GAGGTTCAGGCCGAACTGGCACGGGGCGGGCGCCGCGCCAGTCTGGACGATCTTCTGCAGGTTCCGACAGTGCTCGATCC
GGCCTGGACCGCCGAGGAAATCCAGCAGGAACTGGACAACTGCTGTCAGGGTATTCTGGGTTATGTGGTGCGCTGGATCG
ATCAGGGCGTGGGCTGTTCCAAGGTGCCGGACATCGCGAACGTAGGTCTGATGGAAGACCGCGCGACCCTGCGCATTTCC
AGTCAGCAGGTCGCCAACTGGCTGCATCATGGGGTTGTCAGTCGGGAACGGGTGCTGGAAACGCTGCAACGCATGGCGGG
CGTGGTGGACGGTCAGAATGCCGGCGATCCGTGCTACCGGCCCATGGCGCCTGGCTTCGACGGCATCGCCTTCGAGGCCG
CCCGCGAGCTGATTTTCCAGGGCCGAGCGGCCCCGAACGGCTATACCGAACCCCGGCTGCATGCCATGCGCCGACGACGC
AAGCAATTGGATGGCACGCGAGCGGATTCCTGA

Protein sequence :
MIERLETGGLKVAKPLYDLVSNEIAPGTGIAPDDFWRDFGAILSELAPRNRELLARRDALQTQLDAWHRERRGQQLDLDA
YRAYLSEIGYLVPEGPDFLVSTTNVDPEIAAIAGPQLVVPLSNARYALNAANARWGSLYDALYGTDAIPEEDHLKRGHDF
NPERGAAVVARAAAFLDATVPLNRGSYGDACGFKLEQGKLVVCLPDNSQTMLTDPAQFIGYRGSPEQVSAILLVHHGLHI
EIQIDREHAIGRESPSGIADILLESAVTCIQDCEDSVAAVDTEDKVGVYRHWLGLMKGDLTVQFSKGGRMVERAMEPDRN
YIRLGGGTLAMPSRALMLVRTVGHLMTTDAVLDAAGQEVPEGMLDAMITVLCALHDVHPDVGARRNSRAGSVYLVKPKLH
GPEEVQLAVDLFARVEAALGLPVNTVKIGIMDEERRTTVNLKECIRVARERIIFINTGFLDRTGDEIHSGMEAGPVPRKG
DMKRQPWLLAYEDWNVDVGLACGLPGHAQIGKGMWTMPDEMRAMLASKIAHPQAGANCAWVPSPTAATLHAIHYHQVDVA
EVQAELARGGRRASLDDLLQVPTVLDPAWTAEEIQQELDNCCQGILGYVVRWIDQGVGCSKVPDIANVGLMEDRATLRIS
SQQVANWLHHGVVSRERVLETLQRMAGVVDGQNAGDPCYRPMAPGFDGIAFEAARELIFQGRAAPNGYTEPRLHAMRRRR
KQLDGTRADS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 55