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Name : Thivi_3127 (Thivi_3127) Accession : YP_006415129.1 Strain : Thiocystis violascens DSM 198 Genome accession: NC_018012 Putative virulence/resistance : Unknown Product : protein-export membrane protein, SecD/SecF family Function : - COG functional category : - COG ID : - EC number : - Position : 3420097 - 3421953 bp Length : 1857 bp Strand : + Note : PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family DNA sequence : ATGAACCGATATCCCCTGTGGAAGAATCTGCTGATCCTGGGCGTGATTCTGGCCAGCCTGCTACTGGCCTGGCCGAACCT TTACTCTCAGGATCCATCGATCGAAATCACCGCCGCCCGCGGCGCCGAGGTCACCGAGGCCAGTGTCGGCGAGGTCCGCG CCGCGCTTGAGAATGCCGGCGTCCCCGTCAAGGGCATCGAAACACGCGAGGGCGGAAAACTGCTGGTCCGCTTCGCCGCG CCCGGCGAGCAGTTACGTGGACAGGAGGCGATCGAGCGTTCGCTCTCCACGAAGTACCGCACGGCGTTGACGCAGTCGGC CGATCTGCCCGGTTGGATGCGCGCGGTCGGTCTCAACCCCATGTCGCTGGGCCTGGATCTGCGCGGCGGTATCCATGTCG TCATCGACGTGGACATGGATGCCGCCCTGGATCAGACGCTGGAGCGCTATCTCGGTGATCTGCGGACTCAGTTGCGCGAC AAAAAGATCCGTTATGTCACCGCCACCCGCGAGGGCGGGCGCATCCTGGTGAAATTCAACGACGCCGAGACCCGCGATGC CGGCGAGAAGGTGCTGAGCCGCGAGTTCCGGGATCTGACCGTTCAGAGCAGTCAGGATGAAGATCGCTATCTGGTCGAGG CCAGCCTGCCGGAGGTCGAGCAGCAGAAGATCAAGGATTTCGCGCTGGAGCAGAACATCACGACCCTGCGCAATCGCGTT AACGCGCTTGGAGTGGCGGAGCCCAGCATCGCCCGACAGGGCGAGCGGCGGATTGTGGTGCAACTGCCGGGCGCGCAGGA TCCCGGTCGTCTGAAAGAACTGCTCGGCGCCACCGCGACCCTGGAATACCGTCTGGTAGACACCGAGGGCAGTGTCGCCG ATGCCGTGGCGGGACGGGTTCCGGTCGGCAGCAAGCTCTATTACGAGCGCGACGGCAGACCGATTCTGCTCAAACGCCGG GTGATCGTGACTGGCGATCAGATCACCGACGCCTCGGCCGGATTCGACGGTCAGAGCGGTACCCCGGCCGTCTTTGTGAA CCTTGATGGCCAAGGCGCGCGACGGATGCGCGACGTCACCACCGAAAACGTCGGCAAACCAATGGCGGTCGTCTTCATCG AGAACCGCACCACCACCGAACTGGTCAACGGCGAGCCGGTCAAGACAACGCGCAAGGTCGAGGAAGTCATCAGCGTCGCC AGTATCCGCGAACCCTTCGGCCGACGCTTCCAGACCACCGGGCTCGACAGCAGCGCCGAGGCCCACGATACCGCCCTGCT GCTGCGCTCGGGCGCGCTGGCGGCGCCGATCCAGATTGTCGAGGAACGCACCATCGGTCCCAGCCTGGGTCAGGACAACA TCGATCAGGGGGTTCGGTCGGTGCTGATCGGACTGGCGCTTGTGGTGATCTTCATGGGGCTCTATTACCGAGCCTTCGGG ATGGTGGCCAATCTAGTGCTGGTCGTCAATCTGGTGATGATCGTGGCCATCCTCTCCATGTTACAGGCCACGCTGACCCT GCCGGGCATTGCCGGCATCGTGCTCACGGTCGGTATGGCGGTGGACGCCAATGTGCTGATCTTCGAGCGTATCCGCGAAG AGATCCGTAACGGCAACTCGCCCCAAGCCAGCATCCATGCCGGTTATGACAAGGCGCTCTCGACCATCGTCGACTCCAAC GTCACGACCCTGATCGCCGCCGTGGTGCTGTTCAGCTTCGGCACCGGTCCGGTCAAGGGGTTCGCGGTGACGCTCTTCAT CGGTATCCTCTCGTCCATGTTTACCGCCATCCTTGGATCCCGCGCCCTGATCAATCTGATCTACGGCGGGCGGCGTCTGA ATAAACTGGGTCTCTGA Protein sequence : MNRYPLWKNLLILGVILASLLLAWPNLYSQDPSIEITAARGAEVTEASVGEVRAALENAGVPVKGIETREGGKLLVRFAA PGEQLRGQEAIERSLSTKYRTALTQSADLPGWMRAVGLNPMSLGLDLRGGIHVVIDVDMDAALDQTLERYLGDLRTQLRD KKIRYVTATREGGRILVKFNDAETRDAGEKVLSREFRDLTVQSSQDEDRYLVEASLPEVEQQKIKDFALEQNITTLRNRV NALGVAEPSIARQGERRIVVQLPGAQDPGRLKELLGATATLEYRLVDTEGSVADAVAGRVPVGSKLYYERDGRPILLKRR VIVTGDQITDASAGFDGQSGTPAVFVNLDGQGARRMRDVTTENVGKPMAVVFIENRTTTELVNGEPVKTTRKVEEVISVA SIREPFGRRFQTTGLDSSAEAHDTALLLRSGALAAPIQIVEERTIGPSLGQDNIDQGVRSVLIGLALVVIFMGLYYRAFG MVANLVLVVNLVMIVAILSMLQATLTLPGIAGIVLTVGMAVDANVLIFERIREEIRNGNSPQASIHAGYDKALSTIVDSN VTTLIAAVVLFSFGTGPVKGFAVTLFIGILSSMFTAILGSRALINLIYGGRRLNKLGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-112 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-112 | 46 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-112 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-112 | 46 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-112 | 46 |
