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Name : Terro_3686 (Terro_3686) Accession : YP_006423232.1 Strain : Terriglobus roseus DSM 18391 Genome accession: NC_018014 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta/140 kD subunit Function : - COG functional category : - COG ID : - EC number : 2.7.7.6 Position : 4398715 - 4403196 bp Length : 4482 bp Strand : - Note : PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subuni DNA sequence : ATGGCAAGCAACACCGAAACGCGCGCCCTTCGCAGCCGTCTCGATTTTTCGAAGATCCCAACCGCAATCCAGATCCCGAA CCTCATCGAGGTACAGCGCCGCAGCTATGAGCGCTTCCTGCAGATGGACAAGCTCCCCCAGGAGCGCGAGGACAATGGAC TCCAGTCGGTCTTCACATCCGTGTTTCCAATCACCGACTTCCGCAACGTCTCCGAGCTCGAGTTCGTCGATTACTCCATC GGCAACTGGGAGTGTAAGTGCGGTTACCTCAAGGGCCTGAACCACCTGCGCACGGCCTGCGTGAACTGCGGCCACATGGT CATCACCGACCCCTTCCACCCGGGCGACGTGCTCTGCCATTTCTGCGGTACCTACAACAAGAACACCCCTGACTTCTGCA CCAAGTGCGGTGACCCGGTCGGTCTGCAACTGAAGTACGACCAGGCAGAATGCGAAGAGCGCGGCATGACCTACGCCGCA CCGCTGAAAGTCACCATCCGGCTCAAGATCTACGACAAGGATCCTGAGACGGGCGTAAAGACCCTGCGCGACATGAAGGA GCAGGAAGTCTTCTTCGGCGACATCCCCCTCATGTCCGCCAACGGTACGTTTATCGTCAACGGCACCGAGCGCGTTATCG TCTCGCAGCTGCACCGTTCGCCCGGCGTCTTCTTTGAGACGGCGAACAACCGTACCTACTTCCTCGGCAAGATCATCCCG TACCGCGGTTCGTGGGTTGAGTTCGAGTACGACCAGAAGAACATCCTGTACGTCCGCATCGATCGCAAGCGCAAGTTCCT CGGAACCATCTTCCTGCGCGCGCTCGGCCTGCGTACGGACGAGGAGATCCTCAAGACCTTCTACACGGCAGACAACATCT CGCTGCGTGACGGCAAGATGTACTGGCAGATCCCTGCAGAGGGCACGACCAACATCGTCGGCATCAAGCCGGCAAATGCC ATCAACGGCACAGACGGCACGGAGATCGTTGCGGCAAACCGCAAGATCAGCTCGTCCCTGCTGGCCAAGATGCGCGCAGG CGGCGTGACGGAAATCGAAGTTGCCCAGAGCGACTTCGACAATGCCATCTTCGCTGCCGATGTGGTCGATCTGACCACGG GCGAGCTGCTGTACGAAGCAAACCAGGAAGCCACCGCGGACAAGCTGCACAAGATTCTGCAGACCGGCTCCACGGGCTTT GAGGTCTTCTTCCCGGAGAAGGATGACGTCGGCAATATCATCACGAACACGCTCAAGCGTGACTCCGTGCGCAAGCCTGA GGAAGCTCTCATCGAGATCTACCGCAAGCTGCGTCCGGGCGATCCGCCGACGCTGGACACCGCGACCGCTCTCTTTGAAG GCATGTTCTTCGATCCGCGCAAGTATGACTTCTCGCGCGTGGGCCGTCTCAAGTTCAACATCAAGCTGTACGAGAGCCAG GACGCAACCAACCTGGACAAGCGCACGCTGACGCCGGAAGACTTCTACGGAACCATCCGTTACCTGCTCAAGCTGCGTCG CAACATCGGCCTTGTGGACGACATCGATCACCTTGGCAACCGTCGCGTCCGCGCGGTTGGCGAGCTGATGGAGAATCAGT TCCGCATCGGTCTTGTGCGTATGGAGCGCGCCATCAAGGAAAAGATGAGCGTCTACCAGGAGATGTCGACGGCGATGCCG CACGACCTCATCAACGCCAAGCCCGTGATGGCTGCCATCCGCGAGTTCTTCGGATCCTCGCAGCTGTCGCAGTTCATGGA TCAGACGAACCCCTTGAGCGAGATCACGCACAAGCGCCGTCTGTCGGCCCTTGGACCTGGTGGTCTGTCGCGTGAGCGCG CTGGCTTCGAAGTCCGCGACGTTCACCCCACTCACTACGGCCGTATCTGCCCGATTGAAACGCCGGAAGGCCCGAACATC GGTCTCATCTCGTCGCTGTCGTGCTTCGCGCGCATCAACGAGTACGGCTTCATCGAGTCGCCTTACCGCAAGGTCAAGGA CGGTCAGGTCGTCGACTACGTCGCCGTCACCAACGCGGGTGAGAGCGGCTTCCGTCAGGGTGATCCGATTGAGATCAACG AGTCGCACGCGCTCAAGCAGCAGCTGGCGAAGGATGGCAAGCGTGTCCTTGAGACCGAGCCGTTCTCGTTCTACCTGTCC GCATGGGAAGAGGATCGCCACACGATCGCGCAGGCAAACATCACGCTCGATGAGAACGGCAAGCTGACCGAAGATCTGGT CAACGCTCGCCGCCAGGGTAACTTCGTCCTGGTGCCGCAGGCTGAGGTCGATTACATCGACGTCTCGCCGAAGCAGCTCG TCTCCGTGGCCGCATCGCTCGTGCCCTTCCTTGAGCACGATGACGCGAACCGCGCACTGATGGGCGCCAACATGCAGCGC CAGTCGGTTCCCCTGCTCGTCGCAGAGGCTCCGTTTGTCGGTACCGGCATGGAAGGCGTCACCGCGCGCGACTCCGGCGC TGTGATCCTTGCCCGTCGTAACGGCATCATCGACTCGGTCGACTCCGAGCGCATCATCGTCCGTGTAGAAGGCGAGCATC ACCCCACGCAGCTGTCGCGTGAGGTTGGTTCGGACATCTACCAGCTCACGAAGTTCAAGCGCTCCAACCAGAACACCTGC ATCAATCAGAAGCCGATCGTCCGCAAGGGTGACCGTGTTCTGAAGGGCCAGGTCATCGCAGATGGTCCTTGCACAGAGCA GGGCGAGTTGGGTCTTGGCCGTAACGTGCTCGTCGGCTTCATGCCGTGGCGCGGTTACAACTTCGAGGACGCAATCCTCA TCTCGGAAAAGCTGGTCCGCGAGGACTACTACACCTCGATCCACATCGAGGAGTTCGAGATCGAAGCGCGCGACACGAAG CTGGGACCGGAAGAGATCACGCGCGATATCCCCAACGTCTCCGAGCACGCTCTGCGTGACCTGGACGAGTCGGGCATCAT CCGCATCGGTGCAAAGGTTGGTCACAACGACATCCTCGTCGGCAAGGTAACGCCTAAGGGCGAAACCCAGCTGACGCCGG AAGAGAAGCTGCTCCGCGCCATCTTCGGTGAAAAGGCCGGCGATGTTCGCGATGCTTCGCTCACGTGCCCTCCCGGTATC GAAGGCACCGTCGTCGACATCCGCATCTTCTCCCGCAAGGGTCAGGAAAAGGACGAGCGCGCGAAGTCCATCGAGCAGGA GCAGATTGAGAAGCTGGAGAAGAACCTGGCTGACGAAATCCGCATTCTGACGGACGAGCGTCTCAAGCGCCTTGAGGCAA TCCTGGGTGGCAAGGAAGTGCAGGCTGACCTGCATGACGAGCGCACCAACAAGAAGCTGCTCTCGAAGGGCGATAACCTC GACCGCGATACCATCGAGCTGATCAGCACGCGCAACCTGAAGCGTATCCGTTACGCCGACAAGGATCCCCGCGTGAACGA GCAGATCGATGAGATCGAAGAGATGACCTCGCGCCAGATCGATGTTCTGCGCAAGATCACCAATGAGAAGATCAGCAAGC TGCAGAAGGGCGATGAACTGAGCCCGGGCGTCATCAAGATGGTCAAGGTGTACATCGCGATGAAGCGCCGTCTCTCAGTC GGCGACAAGATGGCAGGCCGTCACGGTAACAAGGGTGTCGTTGCTCGCATCCTGCCGGAAGAGGACATGCCGTACCTTCC CGACGGTACCCCCGTTGAGATCGTGCTGAATCCGCTTGGCGTGCCTTCGCGTATGAACGTCGGTCAGATCCTCGAGACGC ATCTTGGATGGGCCGCGCACAAGCTGGGCGCCATGATCGCCGAGATGGCAGCACAGGCTGAGAATGCCAACGAGATCCGC GAGCTCTTCAAGGCGCGCTTCAAGGACACGGCTGCTCTCAACCAGCTGCTGGAACTGGATGACGAAATGACGGTGCGTGT TGCGGCCGGCATGAAGCGTGGCATCTGGTTCGGCACCGCGGTCTTCGACGGCGCACGTGAGACGGAGATCAAGGCGCTCC TCGCAGCGGCTGGTCTGCCCTCCTCGGGCAAGTCCGAACTGTTCGACGGTATGACCGGCGAGCCGTTCGAACAGCCGGTC ACCGTTGGCTACATCTACATGCTGAAGCTGAGCCACCTTGTGGACGACAAGATCCACGCGCGTTCCATCGGACCGTACTC CCTCATCACGCAGCAGCCGCTGGGTGGTAAGGCACAGTTCGGCGGACAGCGCTTCGGTGAGATGGAAGTGTGGGCGCTTG AAGCTTATGGCGCTGCATACATCCTGCAGGAGCTGCTCACTGCCAAGTCCGACGATGTCTTCGGCCGTACCAAGATCTAC GAAGCCATCGTGAAGGGCGAGGCGGCGATCGAGCCCGGCGTGCCGGAGTCGTTCAACGTGCTCATCCGCGAGCTGCAGTC GCTCTGCCTCGATGTCGAGCTGGTCAAGCAGGAGGATCTCAAGAAGATCCCGATGCTGCCCATCGCAGCTGCTGCTGACT AA Protein sequence : MASNTETRALRSRLDFSKIPTAIQIPNLIEVQRRSYERFLQMDKLPQEREDNGLQSVFTSVFPITDFRNVSELEFVDYSI GNWECKCGYLKGLNHLRTACVNCGHMVITDPFHPGDVLCHFCGTYNKNTPDFCTKCGDPVGLQLKYDQAECEERGMTYAA PLKVTIRLKIYDKDPETGVKTLRDMKEQEVFFGDIPLMSANGTFIVNGTERVIVSQLHRSPGVFFETANNRTYFLGKIIP YRGSWVEFEYDQKNILYVRIDRKRKFLGTIFLRALGLRTDEEILKTFYTADNISLRDGKMYWQIPAEGTTNIVGIKPANA INGTDGTEIVAANRKISSSLLAKMRAGGVTEIEVAQSDFDNAIFAADVVDLTTGELLYEANQEATADKLHKILQTGSTGF EVFFPEKDDVGNIITNTLKRDSVRKPEEALIEIYRKLRPGDPPTLDTATALFEGMFFDPRKYDFSRVGRLKFNIKLYESQ DATNLDKRTLTPEDFYGTIRYLLKLRRNIGLVDDIDHLGNRRVRAVGELMENQFRIGLVRMERAIKEKMSVYQEMSTAMP HDLINAKPVMAAIREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLSRERAGFEVRDVHPTHYGRICPIETPEGPNI GLISSLSCFARINEYGFIESPYRKVKDGQVVDYVAVTNAGESGFRQGDPIEINESHALKQQLAKDGKRVLETEPFSFYLS AWEEDRHTIAQANITLDENGKLTEDLVNARRQGNFVLVPQAEVDYIDVSPKQLVSVAASLVPFLEHDDANRALMGANMQR QSVPLLVAEAPFVGTGMEGVTARDSGAVILARRNGIIDSVDSERIIVRVEGEHHPTQLSREVGSDIYQLTKFKRSNQNTC INQKPIVRKGDRVLKGQVIADGPCTEQGELGLGRNVLVGFMPWRGYNFEDAILISEKLVREDYYTSIHIEEFEIEARDTK LGPEEITRDIPNVSEHALRDLDESGIIRIGAKVGHNDILVGKVTPKGETQLTPEEKLLRAIFGEKAGDVRDASLTCPPGI EGTVVDIRIFSRKGQEKDERAKSIEQEQIEKLEKNLADEIRILTDERLKRLEAILGGKEVQADLHDERTNKKLLSKGDNL DRDTIELISTRNLKRIRYADKDPRVNEQIDEIEEMTSRQIDVLRKITNEKISKLQKGDELSPGVIKMVKVYIAMKRRLSV GDKMAGRHGNKGVVARILPEEDMPYLPDGTPVEIVLNPLGVPSRMNVGQILETHLGWAAHKLGAMIAEMAAQAENANEIR ELFKARFKDTAALNQLLELDDEMTVRVAAGMKRGIWFGTAVFDGARETEIKALLAAAGLPSSGKSELFDGMTGEPFEQPV TVGYIYMLKLSHLVDDKIHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYILQELLTAKSDDVFGRTKIY EAIVKGEAAIEPGVPESFNVLIRELQSLCLDVELVKQEDLKKIPMLPIAAAAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 53 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | CP000034.1.gene3741. | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | CP001138.1.gene4362. | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_002695.1.914942.p | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | CP001918.1.gene250.p | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | CP000647.1.gene4402. | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_010611.6233925.p0 | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_011595.7060572.p0 | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_010410.6003841.p0 | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_011586.7046027.p0 | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_010400.5987325.p0 | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_002516.2.881699.p | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_008702.1.4609796. | Protein | 0.0 | 53 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_009085.4918494.p0 | Protein | 0.0 | 52 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | CP004022.1.gene2794. | Protein | 0.0 | 52 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | CP002695.1.gene18.p0 | Protein | 0.0 | 52 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | NC_011035.1.6448762. | Protein | 0.0 | 51 |
| Terro_3686 | YP_006423232.1 | DNA-directed RNA polymerase subunit beta/140 kD subunit | CP000675.2.gene392.p | Protein | 0.0 | 49 |
