|
Name : Ornrh_2207 (Ornrh_2207) Accession : YP_006428132.1 Strain : Ornithobacterium rhinotracheale DSM 15997 Genome accession: NC_018016 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 2255645 - 2258236 bp Length : 2592 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB DNA sequence : ATGGATATCAATAAATTTACAATAAAATCGCAAGAAGTGGTGCAAAAGGCACAGCAACTTGCACAAATGCATGGAAACCA AGCGATAGAGAACGGTCATTTAATGGAGGCTCTATTGAACGAAGATAATCAAGTAATTGAGTTTATTCTTAAAAAACAGG GCGTAAACATAGATTATTTGAAAAAAGAATTAGAAAAAATTATAAATACCTACGCCAAGGTTACGGGAGGCGATATGCAT GTTTCGTCGGCATTGAGTCGTGTGCTAAACGATGCATCGATCGAGGCGCAAAAGATGAAAGATGATTTTGTGAGTGTGGA GCATTTGCTTTTAGCTTTATTGAATGCCAATGATAGAGTATCTGATTTGCTTAAATCCTTGGGGGCTTCGCATCAAGGTA CTTTAGATGTGAGTGCAGAGCTTAGAAAAGGCGAGCGTGTAACTTCTCAAAGTGCGGAGGATACCTATAATTCGCTTTCA AAATATGCCAAAAACTTAAACGATTTGGTGATTGAAGGGAAATTAGATCCTGTGATTGGGCGTGACGAGGAAATTCGCCG AGTATTGCAAATTTTGTCGAGAAGAACTAAAAACAACCCGATTCTAATCGGTGAGCCAGGGGTGGGTAAAACTGCCATTG CCGAAGGCTTAGCGCACAGAATCGTAAACGGCGATGTGCCCGAAAACTTGAAAGATAAAATAATCTATTCACTGGATATG GGGGCACTCGTTGCAGGGGCTAAGTACAAAGGTGAATTTGAGGAAAGATTAAAATCAGTGGTAAAAGAAGTGACTGGCTC CGAGGGGCAAATCATTTTGTTTATCGATGAAATTCACACACTTGTAGGTGCTGGTGGTGGAGAAGGTGCAATGGATGCTG CCAATATTTTGAAACCAGCCTTGGCTCGTGGTGAGTTGCGTTCAATTGGGGCTACGACCTTAAACGAATACCAAAAATAT TTTGAAAAAGATAAAGCACTTGAGCGTCGATTCCAAAAAGTAATGGTGGAAGAACCAAACGAAGAAGATGCAATTTCTAT CTTGCGTGGTATCAAAGAAAAATATGAAGTTCACCATAAAATCAGAATCAAAGACGAGGCGATTATCGCTGCCGTTGAGC TTTCGGAAAGATATATTTCAGATAGATTTTTGCCAGATAAAGCAATTGATTTAATCGATGAAGCCTCTTCTAAATTGCGT ATGGAAATGAATTCCAAACCAGAGGAACTAGATGTTTTGGATAGAAAAATCATGCAATTAGAAATTGAAATCGAAGCGAT TAAGCGTGAAAACGATGAGCGAAAATTAGCTTTATTAAAACAAGAACTTTCTGAATTAAATGATAAAAGAAGCGAATTGA ATGCAACTTGGCAGTCTGAAAAAAGTTTGGCAGACAACATTCAAGTGGCTCGCAAAAATATCGAAGATTTAAAATTGGAA GCCGAGCGTGCCGAGCGTTTGGGCGATTACGGAAAAGTAGCAGAAATCCGTTACGGTAAAATTAAAGAAGAAGAAGCTAA GTTGGCTGAATTGGAAAAACAATTTACCGACCAAGATGCCAAAATGATTAAGGAAGAAGTGGACAGGGAAGACATTGCCG AAGTGGTAGCTCGCTGGACAGGAATCCCTGTAACCAAAATGATGCAATCTGAGCGAGATAAATTGCTTAATCTTGAATCT GAATTGCACCGACGTGTCATTGGGCAAGAAGAAGCAATCTCTGCCGTGTCTGATGCGATTCGTAGAAACCGTGCAGGCTT GAGCGATGAGCGTAGACCGATTGGTTCGTTCCTATTCTTAGGTTCGACTGGGGTAGGGAAAACCGAGCTGGCAAAAGCCT TGGCGGAATATCTATTCGACGACGAAGATAGTATGACGCGTATCGACATGAGTGAATACCAAGAGCGTCACGCCGTGAGC CGTTTGGTAGGAGCGCCTCCGGGCTATGTGGGTTACGATGAAGGTGGACAATTGACTGAGGCAGTTCGCCGTCGCCCATA TTCAGTGGTGCTTTTAGATGAGATAGAAAAAGCGCATCCAGATGCATTCAATATCTTGTTGCAGGTGCTTGACGATGGAC GATTGACGGACAATAAAGGGCGCACCGTGAATTTCAAAAACACGATTGTGATCATGACATCAAACATCGGTTCGCACATT ATTCAAGATAATTTTGCCGATTTGGAAAACAAAGACGAAGAAGCTGTTTTAAGCCAAACAAAAGAAGAAGTATTTACATT ATTAAAACAAAGCTTTAAGCCAGAATTCCTAAACCGTATCGATGAAACAATCCTTTTCAAACCATTGAAGAGAGAAGAAA TCAAAGAAATCGTGGAATTACAATTGAAATCTTTGTCGAAATTATTGGCAAAACGAGAAATCGTACTGGACACTACACCA GAGGCTATTAATTATTTGTCAAGAATTGGTTATGATCCGCAATTTGGGGCAAGACCAATCAAAAGAGCCATTCAGCAAGA AGTGCTCAACAAATTGTCCAAAGAAATTTTGGCGGGTAATGTACACGACAACTCTGTAGTGCTCATCGATTATTTCGAAG AAAGCGGATTGGTTTTCAGAACCAAAGAATAA Protein sequence : MDINKFTIKSQEVVQKAQQLAQMHGNQAIENGHLMEALLNEDNQVIEFILKKQGVNIDYLKKELEKIINTYAKVTGGDMH VSSALSRVLNDASIEAQKMKDDFVSVEHLLLALLNANDRVSDLLKSLGASHQGTLDVSAELRKGERVTSQSAEDTYNSLS KYAKNLNDLVIEGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGVGKTAIAEGLAHRIVNGDVPENLKDKIIYSLDM GALVAGAKYKGEFEERLKSVVKEVTGSEGQIILFIDEIHTLVGAGGGEGAMDAANILKPALARGELRSIGATTLNEYQKY FEKDKALERRFQKVMVEEPNEEDAISILRGIKEKYEVHHKIRIKDEAIIAAVELSERYISDRFLPDKAIDLIDEASSKLR MEMNSKPEELDVLDRKIMQLEIEIEAIKRENDERKLALLKQELSELNDKRSELNATWQSEKSLADNIQVARKNIEDLKLE AERAERLGDYGKVAEIRYGKIKEEEAKLAELEKQFTDQDAKMIKEEVDREDIAEVVARWTGIPVTKMMQSERDKLLNLES ELHRRVIGQEEAISAVSDAIRRNRAGLSDERRPIGSFLFLGSTGVGKTELAKALAEYLFDDEDSMTRIDMSEYQERHAVS RLVGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIEKAHPDAFNILLQVLDDGRLTDNKGRTVNFKNTIVIMTSNIGSHI IQDNFADLENKDEEAVLSQTKEEVFTLLKQSFKPEFLNRIDETILFKPLKREEIKEIVELQLKSLSKLLAKREIVLDTTP EAINYLSRIGYDPQFGARPIKRAIQQEVLNKLSKEILAGNVHDNSVVLIDYFEESGLVFRTKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-101 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-104 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 8e-105 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ornrh_2207 | YP_006428132.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 8e-119 | 47 |
