Gene Information

Name : Desde_3002 (Desde_3002)
Accession : YP_006431094.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : cysteine desulfurase NifS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2997867 - 2999066 bp
Length : 1200 bp
Strand : -
Note : PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS

DNA sequence :
ATGCGCAGAGTATACCTTGACCATAGCGCGACAACTCCAGTCGATCCTGAAGTTGCTAAGCTCATGATGACTTATTACAC
AGAGAAATATGGAAATCCCTCCAGTGTTCACAGCTTTGGACGGGACGCCAAAGCAGCCTTGGAGAACGCCAGAGAGTCTG
TTGCCAAGCTTCTGGGTGCACAACCTACAGAAATCACCTTTACCAGCGGCGGCACAGAGGCAGATAACCTTGCCATAATC
GGAACGGCTGAAGCTCAGAGCAAAAAAGGAAAACATATCATCACTTCAGCTGTTGAACACCACGCTGTCCTGGAGACCTG
TGAATTCCTTGAGAAGAATGGCTATGAGCTCACCATTGTTCCGGTGGATGAAGAAGGACTTATCGCTGTTGAAGATGTTG
AAAAGGCCATTCGACCCGATACGATATTGATTACGATCATGCACGCCAATAACGAAGTGGGAACCATTCAGCCTATTGCT
GAGATCGGGAAGTTAGCTCGGGATAAAGGGATTGTCTTCCATGTGGATGCGGTACAATCCTTTGGCAAGATTCCCATCGA
TGTGGTAGCTATGAATGTGGACCTGATGACCGTATCAAGCCACAAGATTTATGGACCGAAAGGGGTAGGAGCTCTTTACA
TCCGCAAAGGTGTCCGGGTTATTCCCCGCATCTATGGCGGTGGCCAAGAGAAGAAACGCCGTTCCGGTACAGAAAACACT
CCTGGAATCATCGGTTTCGGCAAAGCCTGTGAGATAGCTGCTCAGCGGATGGAAGAGGAAGCTGCCCGGGAAGCCAAGCT
AAGAGACAAGCTTCTCGAAGGCATTATGGAAAAGATAGATTACGTGAAATTGAATGGACCTCAAGGAGAGAAACGCCTCC
CTGGTATTTTGAATGTCAGCATTCAATTCATTGAAGGTGAAGCACTTCTTTTAAGCCTTGATATGATGGGCATTGCTGCT
TCCAGCGGCTCAGCCTGCACCTCCGGATCTTTAGATCCCTCTCATGTCTTGCTGGCCATGGGATTGACTCACGAAATTGC
TCATGGTTCCTTGCGGTTCTCCTTCGGACGTCAGAATACGGAGGAAGATGTGGATTATGTCTTAGAACAATTACCAAAAA
TCGTAGAACGGCTGCGGATGATGTCTCCGCTCTACGACCAGGCCAAACATAGCAAATGCAGTCAGGCAAAAGCGCAATAA

Protein sequence :
MRRVYLDHSATTPVDPEVAKLMMTYYTEKYGNPSSVHSFGRDAKAALENARESVAKLLGAQPTEITFTSGGTEADNLAII
GTAEAQSKKGKHIITSAVEHHAVLETCEFLEKNGYELTIVPVDEEGLIAVEDVEKAIRPDTILITIMHANNEVGTIQPIA
EIGKLARDKGIVFHVDAVQSFGKIPIDVVAMNVDLMTVSSHKIYGPKGVGALYIRKGVRVIPRIYGGGQEKKRRSGTENT
PGIIGFGKACEIAAQRMEEEAAREAKLRDKLLEGIMEKIDYVKLNGPQGEKRLPGILNVSIQFIEGEALLLSLDMMGIAA
SSGSACTSGSLDPSHVLLAMGLTHEIAHGSLRFSFGRQNTEEDVDYVLEQLPKIVERLRMMSPLYDQAKHSKCSQAKAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 5e-71 50