Gene Information

Name : Desde_4057 (Desde_4057)
Accession : YP_006432112.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4136347 - 4137177 bp
Length : 831 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain

DNA sequence : 
GTGAGTGTGATTGAACTCAAACGAATGGCCAATCAAATACGCCAGGATATTATTACCATGCTTGTGCCGGCCAAATCAGG
TCATCCTGGAGGCAGCCTATCTGCTGCGGACATACTAGCGGTTCTGTATTTTCATGAGATGAACGTTAATCCGGAGGATC
CCCATTGGGTTGATCGGGATCGCTTTGTATTAGCTAAGGGACATGCTGCACCGGTGCTTTATGCAGCCCTTGTTGAAAAG
GGCTTCTTTCCCAAAGAGGAAATCCTGGGACTGCGCCAAACCGGTCGGATTCTACAAGGTCATCCGGATATGAAGAAAGT
CCCCGGTGTGGATATGTCCACGGGCTCTTTGGGCCAAGGGCTTTCTGCAGCCAACGGGATGGCTCTTGCCGGAAAATTGG
ACAAGAAGGATTTCCGGGTCTATGTCGTCTTAGGAGACGGTGAAATGGCGGAAGGCCAAGTGTGGGAGGCAGCTATGGCT
GCAGCTCACTATAAGCTGGATAATGTCATTGCCGTTCTCGACTACAACGGTCTGCAAATTGACGGAACAACGGACAAAAT
TATGTCCTCCGATCCTTTGAACGACAAATGGAAGGCTTTTGGCTGGCATGTCATTGAGGTGGATGGACATGATATAGAAG
ATCTACTGGCTGCCTTTGCCGAAGCTAAAAGTATAAAAGGAAAACCCACCATTCTTATTGCCCGGACCGTCAAGGGTAAA
GGGGTGTCCTTTATGGAAAACCAAGTGGGCTGGCATGGGAACGCACCTAATGCCGAACAAGCAGAGCAAGCCTTGAAGGA
ATTAGGAGAGGAGGCGGCACGCCTTGGCTAA

Protein sequence : 
MSVIELKRMANQIRQDIITMLVPAKSGHPGGSLSAADILAVLYFHEMNVNPEDPHWVDRDRFVLAKGHAAPVLYAALVEK
GFFPKEEILGLRQTGRILQGHPDMKKVPGVDMSTGSLGQGLSAANGMALAGKLDKKDFRVYVVLGDGEMAEGQVWEAAMA
AAHYKLDNVIAVLDYNGLQIDGTTDKIMSSDPLNDKWKAFGWHVIEVDGHDIEDLLAAFAEAKSIKGKPTILIARTVKGK
GVSFMENQVGWHGNAPNAEQAEQALKELGEEAARLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 4e-42 43
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 1e-41 42
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 6e-42 42
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 5e-42 42
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 2e-42 42