Gene Information

Name : Desde_4183 (Desde_4183)
Accession : YP_006432237.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4257619 - 4257906 bp
Length : 288 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGAGTAAAACAGAAGCTTTAGGATTAATTGAGACCAAAGGTTTAGTAGGAGCTATCGAAGCCGCCGATGCTATGGTTAA
AGCCGCTAATGTCTATCTTATCGGCCGCGAATTTGTCGGCGGTGGTTTAGTAACCGTTATGGTAAGAGGGGATGTCGGTG
CTGTCAAGGCAGCAACCGATGCCGGAGCTGCTGCTGCTCAGCGGGTTGGCGAGCTCATCTCCGTCCATGTCATCCCCCGT
CCCCACAGTGACGTGGAAATGATTCTCCCTGCCAAAAAAGAAGGTTAA

Protein sequence : 
MSKTEALGLIETKGLVGAIEAADAMVKAANVYLIGREFVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELISVHVIPR
PHSDVEMILPAKKEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 68
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 68
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-13 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_4183 YP_006432237.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 7e-16 68
Desde_4183 YP_006432237.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 6e-15 68
Desde_4183 YP_006432237.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 5e-14 62