Gene Information

Name : Desde_4199 (Desde_4199)
Accession : YP_006432253.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4272138 - 4272428 bp
Length : 291 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
GTGGAGAAAAATGATGCTTTAGGGTTTATAGAAACTTATGGACTGGTTTCGGTGCTGGAAGCTGCGGATGCTATGTGCAA
GGCAGCAGAAGTGGAATTGGTGGGTTATGAGAATGTTGCTTCAGGTCTGATCTCCGTGGTGGTCCGGGGGGATGTGGGAG
CAGTAAAAACAGCGGTAGAGGCCGGCATCGAAGCAGCCGGCAAGGTGGGTAAAATTTATAGCACCAATGTAATTGCCAGG
CCCCATCCCGATGTAGAGAAAATTGTAGCCAAGCACCTTATTGATTGGTAA

Protein sequence : 
MEKNDALGFIETYGLVSVLEAADAMCKAAEVELVGYENVASGLISVVVRGDVGAVKTAVEAGIEAAGKVGKIYSTNVIAR
PHPDVEKIVAKHLIDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-22 64
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-24 62
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-23 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_4199 YP_006432253.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 4e-23 64
Desde_4199 YP_006432253.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 3e-24 62
Desde_4199 YP_006432253.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 6e-24 61