Gene Information

Name : Desde_4200 (Desde_4200)
Accession : YP_006432254.1
Strain : Desulfitobacterium dehalogenans ATCC 51507
Genome accession: NC_018017
Putative virulence/resistance : Virulence
Product : carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4272455 - 4272751 bp
Length : 297 bp
Strand : -
Note : PFAM: BMC domain

DNA sequence : 
ATGGAATACTTTGGCGAAGAAGCCTTAGGACTTATTGAAACCAGGGGAATGGTTCCGGCCATCGAAGCGGCGGATGTCAT
GTGCAAAACTGCAGATGTGGTGCTTGTTTCCTATGAAAATATTGGCTCAGGGCTGGTCACCGTTATGGTGAAAGGGGATG
TCGCCGCAGTAAGATCGGCAGTAGAAAAAGGAGCAGCAGCTGCAGCAGCGATTGGAGAACTAACGGCCGCCCACGTTATG
CCGCGCCCCGTCAGCCGGGTGGGCAAGATTGTTTCAAGACATGATATCGATGCTTAA

Protein sequence : 
MEYFGEEALGLIETRGMVPAIEAADVMCKTADVVLVSYENIGSGLVTVMVKGDVAAVRSAVEKGAAAAAAIGELTAAHVM
PRPVSRVGKIVSRHDIDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 8e-15 61
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-14 58
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desde_4200 YP_006432254.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 3e-15 61
Desde_4200 YP_006432254.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 2e-14 58
Desde_4200 YP_006432254.1 carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 7e-15 58