Gene Information

Name : Desti_3487 (Desti_3487)
Accession : YP_006448402.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Virulence
Product : type I secretion system ABC transporter, HlyB family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4097818 - 4099941 bp
Length : 2124 bp
Strand : +
Note : PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ABC transporter, HlyB family

DNA sequence :
ATGGAGGGAGGTAATCCGCCACAAATCGATCCAGGTTTAGCCTGTCTCGTTATTATCGCACGTTTCCATGCTATCGCAGC
AGATCCAGATCAACTTGCCCATCAATTCAAAGTGGATGGCAAGCCATTCTCCAAATCCGACATTCTCCTTGCGTCCAAAC
AACTCGGTCTGGAAGCCAAAGCTGTGAAAACTGTCCCGAAGCGTCTCGATAGAACCCCCTTGCCTGCTCTTGCTCTCTGT
AAGGATGGTAGCTGCTTCATACTTGCACGGAGCAACAGTGAGCAAGTCTTGATACACGATCCGGCTGCAGGACTTCCTCA
GATGATATCGCTCGCTGACCTGAGTAACCGATGGACCGGTGAGCTCATTCTCTTCACGTCACGTGCGTCTCTTGCTGGAG
AGATGAGCAAATTCGATTTCACCTGGTTCATTCCAGCAATAATGAAATATCGTAAATTGTTGAGCGAAGTGCTCCTGGTC
AGTTTTGTGCTCCAGATCTTCGCCCTTATTACTCCTCTCTTCTTTCAAGTGGTAATGGATAAAGTCCTGGTACACAGAGG
CTTCACGACTCTTGATGTCATTGCTATAGGCATGTTTGTGGTAATCGTCTTCCAAGTAGTCTTAAACGGTCTACGGACCT
ACGTCTTCTCGCACACCACCAGTCGGATCGACGTTCAGCTTGGGGCTCAATTGTTCCGTCACTTGCTCAATCTGCCAATG
GCGTATTTCCATTCACGGCGAGTGGGAGATTCGGTCGCTCGAGTGCGTGAACTGGAGAACATACGGAATTTTCTTACCGG
CAATGCAATCACGCTGGTTTTGGATCTGTTATTCTCCGTGGTATTCATGGCAGTAATGCTCTATTACAGCATGTGGCTCA
CTTTGATAGTGGTAATCTCCCTACCCTGCTATGCAATTCTCTCGGTGGTTTTCACCCCTGTTCTTCGTGCCCGCCTCCAT
GAGAAATTCAATCGGGGTGCCGAGAATCATTCCTTCCTGGTGGAGACCCTCTCCGGCATCGGAACAGTGAAGGCAATGGC
AGTCGAACCTCAATTGACCCGCAGGTGGGATAATCAACTGGCAGCGTACGTGTCAACGAGCTTTCGCACCGCGACAACCG
GTAACTTGGCCAGCAGCGGTATTTCACTCATCAGCAAACTGGTGACGGTTGCTACTCTGTGGCTTGGTGCCCGGCTCGTC
ATAAATGGTGACATGACTGTGGGCCAGCTCGTTGCCTTTAACATGCTTGCCGGCCAGGTCTCACAGCCCATAATACGACT
CGCACAACTCTGGTCGGATTTCCAGCAGACTGGTATCTCCATTCAACGACTTGGTGACATTCTCAATGCTCGCACCGAAG
TCTCGAGCGCTAAGAGCACCCTTCCGCCGATTCAGGGAAGGATTGTATTTGACAATGTGGTCTTCCGGTACAAAGCTGAT
GCTCCTGAAGTGCTCAGAGGAATCACCTTTGACATCCGCCCCGGCGAGATCATCGGTATAGTCGGCCGGTCCGGTTCAGG
CAAGAGTACTGTCACCAAGCTCATTCAACGACTGTATGTTCCGGAACGTGGTCGGGTGATGATCGACGGTCTCGATCTTG
CTCTGGCCGACTCCTCCTCACTTCGGCGCCAGATCGGGGTCGTACTCCAGGAGAATGTGCTCTTCAACAGGACAATTCGA
GAGAACATCGCCCTTGTCGACCCGGGAGCGAGTATGGAACAGGTCATCCATGCAGCCAAACTTGCAGGAGCTCATGAATT
CATACTGGAATTGCCCGAAGCCTACGACACCATGGTCGGAGAACATGGAGACACTCTGTCTGGAGGCCAACGCCAAAGAA
TCGCAATCGCTCGTGCTCTTATGACAAACCCTCGCATTCTTATATTCGATGAAGCAACGAGCGCTCTTGATTATGAATCG
GAGCGAATAATTCAAAACAATATGAAAGCGATTTGTGCAAGCCGTACGGTGATCATTATTGCGCATAGACTCTCTGCAGT
CCGCATCACGAATCGCATTTTCGTCATGGATCACGGACAGATCGTTGAACAGGGCCCTCACGCAGAACTGCTGAATCGTG
AAAGAGGCTATTATGCTACTCTTTATCGCCTGCAACAAGGTTGA

Protein sequence :
MEGGNPPQIDPGLACLVIIARFHAIAADPDQLAHQFKVDGKPFSKSDILLASKQLGLEAKAVKTVPKRLDRTPLPALALC
KDGSCFILARSNSEQVLIHDPAAGLPQMISLADLSNRWTGELILFTSRASLAGEMSKFDFTWFIPAIMKYRKLLSEVLLV
SFVLQIFALITPLFFQVVMDKVLVHRGFTTLDVIAIGMFVVIVFQVVLNGLRTYVFSHTTSRIDVQLGAQLFRHLLNLPM
AYFHSRRVGDSVARVRELENIRNFLTGNAITLVLDLLFSVVFMAVMLYYSMWLTLIVVISLPCYAILSVVFTPVLRARLH
EKFNRGAENHSFLVETLSGIGTVKAMAVEPQLTRRWDNQLAAYVSTSFRTATTGNLASSGISLISKLVTVATLWLGARLV
INGDMTVGQLVAFNMLAGQVSQPIIRLAQLWSDFQQTGISIQRLGDILNARTEVSSAKSTLPPIQGRIVFDNVVFRYKAD
APEVLRGITFDIRPGEIIGIVGRSGSGKSTVTKLIQRLYVPERGRVMIDGLDLALADSSSLRRQIGVVLQENVLFNRTIR
ENIALVDPGASMEQVIHAAKLAGAHEFILELPEAYDTMVGEHGDTLSGGQRQRIAIARALMTNPRILIFDEATSALDYES
ERIIQNNMKAICASRTVIIIAHRLSAVRITNRIFVMDHGQIVEQGPHAELLNRERGYYATLYRLQQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 60
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 60
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_3487 YP_006448402.1 type I secretion system ABC transporter, HlyB family VFG0907 Protein 0.0 60
Desti_3487 YP_006448402.1 type I secretion system ABC transporter, HlyB family VFG1557 Protein 0.0 60
Desti_3487 YP_006448402.1 type I secretion system ABC transporter, HlyB family VFG1501 Protein 0.0 60
Desti_3487 YP_006448402.1 type I secretion system ABC transporter, HlyB family VFG1269 Protein 0.0 60
Desti_3487 YP_006448402.1 type I secretion system ABC transporter, HlyB family VFG0841 Protein 0.0 59